Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01241 ATGGCTCGCTCTTTCAGCAACGTCAAGGTTCTCTCTGCTCTAGTCGCCGATGGACTCTCCAACACTCTCACCAGGCGTGGTTACGCGGCAGCGACGCAAAGCGCAACAAGGGGAGGAGGTGGCTCCATCAGCGGCAAGATAGCACCAAAATCAGGGGAAGACAAGGTAGGAGGTGCTGAAAAGGTTTCATGGGTACCAGACCCTGTCACTGGTTACTACAAACCAGAGAACACCAAAGAGATTGATGTTGCTGAGCTTCGAGCAACGCTTATGCGCAAAAAATTCAACCACTAA 294 0.517 MARSFSNVKVLSALVADGLSNTLTRRGYAAATQSATRGGGGSISGKIAPKSGEDKVGGAEKVSWVPDPVTGYYKPENTKEIDVAELRATLMRKKFNH 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01241 97 Pfam Late embryogenesis abundant protein 1 90 IPR004926 -
Cca02g01241 97 MobiDBLite consensus disorder prediction 30 60 - -
Cca02g01241 97 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 94 IPR004926 -
Cca02g01241 97 PANTHER PROTEIN SENESCENCE-ASSOCIATED GENE 21, MITOCHONDRIAL-LIKE 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01241 Cca-Chr2 30320623 30322590 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01241 - - gmx:100527032 173.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02823 03 49574689 49575490 Cca02g01241 02 30320623 30322590 PCT