Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02786 ATGGATACTCTCTGTTTACAAACCAGTATTCGTGGGATAGTTCCTTCCATTCCCATAACTGCAACAACCGCACGTGCCAATGATTATGTTTCACAGTCTCAGGTTAACGCGGTGGGACATTCTTCTTTGTTTTCCAAATTCTCCTTTAGATTCCCTTTGAAGTCTTTATGGCCACATCAATCAGCGGGGAATGCCTCCGGCTACAACGGTCTCGCCGTTGATAACGTTGTTTTGGCGGAAAATGGAACAGCGGAAACAGAAGGAGAAGAAGAGGGTCAGAATGGGAACTGGGTTTTCAAGATTTTTCATACAAGGTCTGTTTGGGGAGGGGAACACAAGAGCCATGACCATGATGAAGAGGATGAACAAGTTGTGGCTAATGAAGAGGAAGAGTGTGATGGTTGCATGGTtgatgatgatgatgatgatgatgatcatgaAGAAAATGAAGAGGTTGTGTTTGACAGAGACTCGTTTTCGAGAATGCTTCGAAGGGTGTCATTGCGCGAAGCCAGATTATATGCACGCATATCCCACTTGGGGAATTTGGCATACTCTATTCCCAAAATCAAACCAGGGAACCTCTTAAAAAACTGTGGTCTGCGTTTTGTAACTTCGTCCATAGAGAAGAAGTTAGTCATGGAAGCTGAAAAAAATCAGACATCTACCACAACACAGAATGAAGAAACAAATGAGAAGGATGAGAGAGACACAAAAGAGAAAAGCAATGGTGGATGCAAGACAAGTGCATCTGCTGCATATGATATTGTTGTTTCTGCTGCATCATATCTCAATGCTCAGACAAGGAACATACTTCCATTCAAATCTTCTGATGCTGTCGAAGGTGAAGGTTCACTTGAAACAAGCAATGAAAGATTTGACAATGATAAGACGTTAAACAAGGATGTGGCGGCTTTACGGGCAACTACAAATTCAGTTACAGCAGTAGTTGCTGCAAATGAGGAAGTAAAACAGGCTTTTGCAGATGATTTGAACTCAACAAGATCTTCACCTTGTGAATGGTTCGTATGTGATGATGACCAGACCTCTACAAGATACTTTGTGATCCAGGGCTCCGAGTCTTTTGCATCATGGCAAGCAAACCTACTATTTGAGCCAGTTCAATTTGAGGGGTTTGATGTGCATGTACATAGAGGTATATACGAGGCTGCAAAAGGGACATATCAGCAAATGTTACCAGAAGTTCGTGCTCACCTAAAATCTCATGGTTCCCGTGCAACTTTTCGTTTCACTGGTCATTCTCTTGGGGGGAGTTTGGCATTACTTGTGAATCTTATGTTGTTGATAAGGAGTGAAGCACCGTTATCATCTCTGCTTCCCGTGATAACATTTGGCGCACCATCCATCATGTGTGGAGGTGATAGTTTACTTGACAAGCTAGGATTGCCACGGAGCCATGTTCAGGCAATCACATTGCACAGAGACATAGTTCCACGAGCATTTTCTTGCAAGTACCCTAACCATATCGCCGAACTACTAAAGGCTCTTAATTTTAACTTCCGTAATCATCCTTGCCTTAATAACCAGAAACTGTTATATGCACCAATGGGTGAACTGCTGATTCTACAGCCAGATGAGAATTTTTCGCCAAGTCATCATCTTCTGCCCTCAGGCAGTGGTCTATATCTTTTGAGTGGTCCTTTCTCAGAATCTAATGACACGACAAAAGAACATATTTACGCAGCTCAAATGGTGTTCTTGAACACACCACACCCACTTGAGATATTAAGTGACCGATCTGCCTATGGTTCTGGAGGAACCATTCAAAGAGATCATGACATGAATTCATACTTAAAATCTGTGAGAACCGTGATTCGCCAAGAACTTAACCAGATTCGCAAGGCAAGGAGAGATCAAAGGCGAAAGGTGTGGTGGCCTCTGGTGGCGCCACGTGGAAATGATGCGGGCATGGTTGTTGGGAGGTCCGTGATGTCTGTTAACATGATTCATCAAGAGCAGTCTCCATTCTCTGGCATCATTCAGATAAGTAGAGAGTCATTGAATAGGTTCAGTAGTCTTGTTGCGTCCCAACACATGCAATTGTTTATAGTGTTCCTTTTTCCTGCACGGTTGTTACTCGTGGGAGCATGCAACTTGATTAGCTTAAGATGA 2133 0.4257 MDTLCLQTSIRGIVPSIPITATTARANDYVSQSQVNAVGHSSLFSKFSFRFPLKSLWPHQSAGNASGYNGLAVDNVVLAENGTAETEGEEEGQNGNWVFKIFHTRSVWGGEHKSHDHDEEDEQVVANEEEECDGCMVDDDDDDDDHEENEEVVFDRDSFSRMLRRVSLREARLYARISHLGNLAYSIPKIKPGNLLKNCGLRFVTSSIEKKLVMEAEKNQTSTTTQNEETNEKDERDTKEKSNGGCKTSASAAYDIVVSAASYLNAQTRNILPFKSSDAVEGEGSLETSNERFDNDKTLNKDVAALRATTNSVTAVVAANEEVKQAFADDLNSTRSSPCEWFVCDDDQTSTRYFVIQGSESFASWQANLLFEPVQFEGFDVHVHRGIYEAAKGTYQQMLPEVRAHLKSHGSRATFRFTGHSLGGSLALLVNLMLLIRSEAPLSSLLPVITFGAPSIMCGGDSLLDKLGLPRSHVQAITLHRDIVPRAFSCKYPNHIAELLKALNFNFRNHPCLNNQKLLYAPMGELLILQPDENFSPSHHLLPSGSGLYLLSGPFSESNDTTKEHIYAAQMVFLNTPHPLEILSDRSAYGSGGTIQRDHDMNSYLKSVRTVIRQELNQIRKARRDQRRKVWWPLVAPRGNDAGMVVGRSVMSVNMIHQEQSPFSGIIQISRESLNRFSSLVASQHMQLFIVFLFPARLLLVGACNLISLR 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02786 710 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 21 706 IPR043367 GO:0008970
Cca03g02786 710 Pfam Lipase (class 3) 354 490 IPR002921 GO:0006629
Cca03g02786 710 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 21 706 - -
Cca03g02786 710 MobiDBLite consensus disorder prediction 215 247 - -
Cca03g02786 710 CDD Lipase_3 302 486 - -
Cca03g02786 710 Coils Coil 605 625 - -
Cca03g02786 710 MobiDBLite consensus disorder prediction 228 243 - -
Cca03g02786 710 Gene3D alpha/beta hydrolase 294 522 IPR029058 -
Cca03g02786 710 SUPERFAMILY alpha/beta-Hydrolases 333 529 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02786 Cca-Chr3 49237264 49240585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02786 1 710 Acyl Lipid Metabolism Gene Families AT1G02660 53.333 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02786 - - gmx:100788786 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02786 03 49237264 49240585 Cca03g02786 03 49237264 49240585 ECH
Cca03g02786 03 49237264 49240585 Cca02g01269 02 30792936 30797730 PCT