Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01269 ATGGAAACTATGTGTGTGAAAGCGGGGTTAGTTCCCCCGATCTCTATCGGTGGGACGGTGGAGGCACGTGGCAGTTCTTCTCAGGTGAGTGTGGTGGGGCGCTCCGCAGCGGATAAATCCCCGCCGAGGTCGTTGTTTTCGAGAGTTTCCTTTCGGAACCCTTTGGAATCTCTCTGGCCGCGGTGGAACACCAGATACAAAGGGCTGGCCCTCGACGACGCCGTTTTGGCGGAGAACGGCGAGGGAAAGGAGGCCGTTAGAGATGACGGCGTGGCTGACGGAACGGAACGCCGGAGCGAAAACTGGGTTTCGAAGATTTGGCATGTGAAGTCCGCGTGGGAGGGGAAACAGAGCTGTGAAGAGGAGGTTGCGGTTAGGGATCAAACCAATGACGATAACGAGGGGGGAGAGGAGGCAGAGGTGTGTGAATGTGATGGTGGTTGCTGGGTCCACGAAGAGAAGGGTGACGAAGAAGAGCCTCAATTCGATAGAGACTCGTTTTCCAGAATGCTTCGCCGGGTCTCGTTAGCTGAAGCTAGATTGTACGCTCAGATGTCACACTTGGGAAGCTTGGCTTACGATATACCTAACATCAAGCCTGGGAAACTCTTAAAACATTATGGTATACGTTTTGTAACTTCATCAATAGAGAAGAAGGAGTTGGCAGCAACAGCTGAAAAAGATCCCCAGAAAGTTGAGACTAATGAGAAGGAAAAGGATTCCCAGAATGTTGAGACTAAAGAGAAGAAAAAAGAAGAAAGAAAGGATCCGGAGAATGGTGGATACATGTTAAGAGCAGATGCTGCTTGTAATATTGCCACCTCTGCTGCCTCTTATCTGCTTGGTCGGACCAGGAGCATATTTCCATTCAAATCCTCAAATGCCGTGACTGGTGAAGGCTCACTTGAAGGAATCATTGAAAGCCGTGACATGATAAACACAGAGGTGGTCTCTTTGATGGCAACTACTGATTCAGTGACAGCAGTGGTTGCAGCAAAGGAAGAAGTAAAGCAGGCTGTTGCAGATGATCTAAACTCTGTACATTCATCACCCTGTGAATGGTTCGTCTGTGATGATGACCAGAGTGGTACCAGATTATTTGCTATTCAGGGTTCTGAGACATTTGCTTCCTGGCAAGCAAACCTACTTTTTGAGCCGATTAAATTTGAGGGGTTGGATGTCCTTGTGCACAGAGGTATATACGAGGCTGCTAAAGGGATATATCAACAGATGTTGCCAGAAGTACATGCTCACCTAAAATCTCGGGGTTCTCGTGCAACTTTTCGCTTCACCGGGCATTCTCTTGGTGGAAGCTTGGCATTACTTGTGAATCTCATGCTGTTGATAAGGAATGAAGTGCCAGTCTCATCTCTACTTCCTGTTATAACATTTGGTTCCCCATCCATCATGTGTGGTGGTGATAGTCTGCTAGAAAAGTTAGGTTTGCCTAGGAGTCATGTTCAAGCAATTACAATGCACAGAGACATAGTACCACGAGCATTTTCTTGCAATTACCCTAACCATGTTGCAAAACTATTAAAGGCTGTCAATGGGAACTTCCGTAGTCATCCTTGCCTCAATAAACAGAAGCTACTATATGCACCAATGGGATATCTGCTGATTCTTCAGCCAGATGAGAAATTTTCACCAAACCATCATCTCCTGCCATCAGGCAGTGGTCTATATATTTTGTGTTGTCCTTTGTCAAAATCCGATTACACAGAAAAGCAGCTTCGAGCTGCTCAAATGGTCTTCTTGAACTCACCTCATCCACTTGAGATATTGAGTGACCGGTCTGCTTATGGATCTGGAGGAAGTATACAAAGAGATCATGACATGAATTCCTACTTAATGTCTGTGAGAACTGTGATTCGCCAAGAACTTAAACAGATCCGTAAAGCTAAGAGAGAGCAACAGCAACAGCGCAAGGTTTGGTGGCCTCTTGTGTTGCCACGTGGAATTGATGCCGGCATTCTTTCTGGGATGTCCATGATATCAGTCAATGTGGGTCAACGCCAGTCAGCCTTTTCTGGCATGATACGAACAGGGAGAAAGTCCTTGAAAAGGTTCAGTAGGCTTGTTACATCCCAACATATGCATTTGTTAGTCTTGCTCTGGTTCCCTGCTCGATTGTTACTTTTGGAACTAATAGCGTAA 2157 0.4645 METMCVKAGLVPPISIGGTVEARGSSSQVSVVGRSAADKSPPRSLFSRVSFRNPLESLWPRWNTRYKGLALDDAVLAENGEGKEAVRDDGVADGTERRSENWVSKIWHVKSAWEGKQSCEEEVAVRDQTNDDNEGGEEAEVCECDGGCWVHEEKGDEEEPQFDRDSFSRMLRRVSLAEARLYAQMSHLGSLAYDIPNIKPGKLLKHYGIRFVTSSIEKKELAATAEKDPQKVETNEKEKDSQNVETKEKKKEERKDPENGGYMLRADAACNIATSAASYLLGRTRSIFPFKSSNAVTGEGSLEGIIESRDMINTEVVSLMATTDSVTAVVAAKEEVKQAVADDLNSVHSSPCEWFVCDDDQSGTRLFAIQGSETFASWQANLLFEPIKFEGLDVLVHRGIYEAAKGIYQQMLPEVHAHLKSRGSRATFRFTGHSLGGSLALLVNLMLLIRNEVPVSSLLPVITFGSPSIMCGGDSLLEKLGLPRSHVQAITMHRDIVPRAFSCNYPNHVAKLLKAVNGNFRSHPCLNKQKLLYAPMGYLLILQPDEKFSPNHHLLPSGSGLYILCCPLSKSDYTEKQLRAAQMVFLNSPHPLEILSDRSAYGSGGSIQRDHDMNSYLMSVRTVIRQELKQIRKAKREQQQQRKVWWPLVLPRGIDAGILSGMSMISVNVGQRQSAFSGMIRTGRKSLKRFSRLVTSQHMHLLVLLWFPARLLLLELIA 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01269 718 Coils Coil 621 644 - -
Cca02g01269 718 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 27 715 - -
Cca02g01269 718 MobiDBLite consensus disorder prediction 223 260 - -
Cca02g01269 718 Gene3D alpha/beta hydrolase 312 534 IPR029058 -
Cca02g01269 718 Pfam Lipase (class 3) 367 504 IPR002921 GO:0006629
Cca02g01269 718 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 27 715 IPR043367 GO:0008970
Cca02g01269 718 CDD Lipase_3 350 506 - -
Cca02g01269 718 SUPERFAMILY alpha/beta-Hydrolases 350 542 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01269 Cca-Chr2 30792936 30797730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01269 1 714 Acyl Lipid Metabolism Gene Families AT1G02660 54.755 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01269 - - gmx:100807834 1070.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01269 02 30792936 30797730 Cca02g01269 02 30792936 30797730 ECH
Cca03g02786 03 49237264 49240585 Cca02g01269 02 30792936 30797730 PCT