Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02783 ATGCCTtccaccttctcacccctcattgctctcatcctcctcctcctTTGGCACACGTGCCAGGCACGTGACCCCTTCGCCTGCGACCCAAAAGATGCCACCACGAACAACATGGCGTTCTGCAAGGGCTCCGTGGCGATAGGGGAGAGGGTGAAGGACCTCATTGGAAGGTTGAGTCTGCAAGAGAAAGTTAGGCTTCTGGTGAACAATGCCGCGCCGCTTCCACGCCTTGGGATCAAAGGCTACGAGTGGTGGTCCGAAGCACTTCACGGCGTTTCCAATGTGGGCCCTGGAACCAAGTTTGATGCTCACTTTCCCGCCGCCACTAGCTTCCCTCAAGTCATCACCACCGCTGCTTCCTTCAACGCTTCTTTGTGGGAAGCAATTGGACGGGTTGTGTCTGATGAAGCAAGGGCCATGTACAACGGTGGAACAGCAGGGCTCACGTATTGGAGTCCAAACGTGAACATTTTCAGGGACCCAAGGTGGGGCCGTGGACAGGAAACTCCCGGTGAGGACCCTGTGCTAGCCGGTAGATATGCCGCTAGTTACGTCAGAGGCCTACAGGGCACCGACGCTAACCGGTTGAAGGTTGCTGCTTGTTGCAAACACTTCACCGCTTATGACCTCGATAATTGGAACGGCGTCGATCGCTTCCACTTTAATGCACAGGTGAGTAAGCAGGACATAGAGGATACATTCGACGTGCCATTCAGAATGTGTGTGAGCGAAGGGAAAGTAGCGAGTGTCATGTGTTCTTACAATCAAGTGAATGGGGTCCCTACTTGTGCCGACCCCAACCTCCTCAAGAAAACTGTTCGCGGACTGTGGCAACTTGATGGGTATATTGTATCAGACTGTGATTCCGTTGGTGTGTTCTATGATAACCAACACTACACATCAACGCCAGAAGAAGCTGCCGCAGATGCCATTAAAGCAGGTTTGGATTTAGACTGTGGGCCTTTTCTAGCTGTGCACACGCAGGACGCGGTCAAAAAGGGATTGCTAAGCGAAGCTGATGTCAACACTGCTTTGGTGAACACACTCACGGTCCAAATGAGGTTAGGGATGTTTGACGGAGAGCCATCGGCCCATCCATATGGTCATTTGGGCCCAAAAGATGTGTGCAAACCGGCCCATCAAGACCTCGCTCTTGAAGCTGCAAGACAAGGAATTGTGCTTCTTAAGAACACTGGCCCTGTTTTGCCTCTATCCCCTCAGCGTCACCATACCGTCGCTGTTATTGGGCCCAATTCTAATGCCACTGTTACAATGATTGGAAACTATGCTGGTATTGCATGTGGATATACCAGCCCCCTACAAGGAATAGGTAGATACGCCCGGACTATTCATCAGTTGGGCTGCCAAAATGTAGCTTGTACTAATGACAGGCAATTTGGGCCTGCCATAAATGCAGCCCGTCAAGCAGATGCAACCGTTTTGGTAATGGGCTTGGACCAGTCCATTGAAGCTGAAACCGTGGACAGGACTGGGTTGCTTTTGCCAGGGCGTCAGCAAGACCTTGTTTCAAAAGTGGCAGCTGCCTCAAAAGGACCAACCATTTTGGTCTTAATGTCCGGTGGGCCTTTGGACATCAGCTTTGCAAAGAACAACCCTCGAATTGTGGGGATCCTGTGGGCCGGTTATCCGGGCCAAGCTGGTGGTGCTGCCATCGCAGATATAGTGTTTGGAACAGCTAACCCAGGGGGGAAGCTGCCTGTGACATGGTACCCGCAAGAATATCTAACAAAGTTGCCAATGACAAAGATGGCAATGCGAGCAAGTAAATCAGCAGGGTACCCAGGAAGAACGTATAGATTCTACAATGGCCCAATGGTGTACCCATTTGGGCACGGATTAACATACACACACTTTGTTCATACATTAGCAAGTGCTCCCACAGTGGTGTCGGTTCCATTGAATGGTCACCGGCGTGCCAATGCGACGAATTTGTCAAACAGGGCAATAAGAGTGTCCCATGCACGGTGTGGGAAGCTCTCGATCACGCTCCAGGTGGACGTAAAAAATGTGGGGTCCAGAGATGGCACACACACGTTGCTAGTGTTCTCTGCTCCACCTGCAGGTGCTGGTGCTCATTGGGCACTAGAGAAGCAACTTGTGGCGTTTGAGAAGGTTCATGTTCGTGCCAAGGGTCAACAGAGAGTTGGAGTGAATATTCACGTGTGCAAGCTTTTAAGTGTAGTGGATAAGTCTGGGATCAGGAGAATCCCGTTGGGGGAACACAGTCTTCATATTGGTGATGTTAGACACTCCGTGTCACTTCAACCTCAAGCACTTGGGATTATCAAGTCCTGA 2316 0.5017 MPSTFSPLIALILLLLWHTCQARDPFACDPKDATTNNMAFCKGSVAIGERVKDLIGRLSLQEKVRLLVNNAAPLPRLGIKGYEWWSEALHGVSNVGPGTKFDAHFPAATSFPQVITTAASFNASLWEAIGRVVSDEARAMYNGGTAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGRYAASYVRGLQGTDANRLKVAACCKHFTAYDLDNWNGVDRFHFNAQVSKQDIEDTFDVPFRMCVSEGKVASVMCSYNQVNGVPTCADPNLLKKTVRGLWQLDGYIVSDCDSVGVFYDNQHYTSTPEEAAADAIKAGLDLDCGPFLAVHTQDAVKKGLLSEADVNTALVNTLTVQMRLGMFDGEPSAHPYGHLGPKDVCKPAHQDLALEAARQGIVLLKNTGPVLPLSPQRHHTVAVIGPNSNATVTMIGNYAGIACGYTSPLQGIGRYARTIHQLGCQNVACTNDRQFGPAINAARQADATVLVMGLDQSIEAETVDRTGLLLPGRQQDLVSKVAAASKGPTILVLMSGGPLDISFAKNNPRIVGILWAGYPGQAGGAAIADIVFGTANPGGKLPVTWYPQEYLTKLPMTKMAMRASKSAGYPGRTYRFYNGPMVYPFGHGLTYTHFVHTLASAPTVVSVPLNGHRRANATNLSNRAIRVSHARCGKLSITLQVDVKNVGSRDGTHTLLVFSAPPAGAGAHWALEKQLVAFEKVHVRAKGQQRVGVNIHVCKLLSVVDKSGIRRIPLGEHSLHIGDVRHSVSLQPQALGIIKS 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02783 771 PRINTS Glycosyl hydrolase family 3 signature 111 130 IPR001764 GO:0004553|GO:0005975
Cca03g02783 771 PRINTS Glycosyl hydrolase family 3 signature 198 214 IPR001764 GO:0004553|GO:0005975
Cca03g02783 771 PRINTS Glycosyl hydrolase family 3 signature 272 290 IPR001764 GO:0004553|GO:0005975
Cca03g02783 771 Pfam Fibronectin type III-like domain 688 754 IPR026891 -
Cca03g02783 771 SMART Fn3_like_2 684 756 IPR026891 -
Cca03g02783 771 Gene3D - 377 623 IPR036881 GO:0004553|GO:0005975
Cca03g02783 771 Gene3D - 50 365 IPR036962 GO:0004553|GO:0005975
Cca03g02783 771 Gene3D Immunoglobulins 646 766 IPR013783 -
Cca03g02783 771 PANTHER SUGAR HYDROLASE-RELATED 4 766 IPR044993 GO:0009044|GO:0045493
Cca03g02783 771 SUPERFAMILY (Trans)glycosidases 40 391 IPR017853 -
Cca03g02783 771 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 4 766 - -
Cca03g02783 771 Pfam Glycosyl hydrolase family 3 C-terminal domain 392 622 IPR002772 GO:0004553|GO:0005975
Cca03g02783 771 Pfam Glycosyl hydrolase family 3 N terminal domain 105 348 IPR001764 GO:0004553|GO:0005975
Cca03g02783 771 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 392 625 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02783 Cca-Chr3 49202786 49210080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02783 8 771 Glycoside Hydrolase AT1G02640 73.438 0.0 1174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02783 - - gmx:100789316 1424.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02783 03 49202786 49210080 Cca03g02783 03 49202786 49210080 ECH
Cca03g02783 03 49202786 49210080 Cca02g01273 02 30852697 30858054 PCT