Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02782 ATGGGAAACCAAATAGCTAGAGACGCCACGGGGAGAATCGTTCACTGGGATGGCTCGGTTCAAGAATTTGACGAGCCACATGCACTAACGGCGGCGGAGCTCATGCTGGACCACCCGCAACAGGTGGTGGTGGAGTTTCACTCCGCCGTGAACCAAAAAAGACCGTCTCCGTTACCCGCTGACGAGAAGCTAGAGGTGAAGAAAACGTATGTGATGGTTCCGGTGATGCGAGGGAAGCCTGTGGGGTTGAGCAGCGAAGATAGTCGCCGGATTCTCTTGATCGTTAACTCTTCTCTGCATTCCAAGTACTTTGTTTCTTCTTCGGGGCTTCTTCCTTGGTTTGCAGGGTTGTTCCAgaggaaggaggaggtggagaagagagaagagagggaggGTTTTTGTGAGTTTTTGGCGGAAGGGAGGGAAGGGTATATGAGTAGGCAGTTATCGGGGAAGGGGTGGAAACCTAGCTTGGACACCATTACGGAGAAGAAGGTTAAGCGGAAACTGTCTCGCTGGTTCTTCCTCAAAACTTTTATTTCTGCAAACATTTAG 555 0.4703 MGNQIARDATGRIVHWDGSVQEFDEPHALTAAELMLDHPQQVVVEFHSAVNQKRPSPLPADEKLEVKKTYVMVPVMRGKPVGLSSEDSRRILLIVNSSLHSKYFVSSSGLLPWFAGLFQRKEEVEKREEREGFCEFLAEGREGYMSRQLSGKGWKPSLDTITEKKVKRKLSRWFFLKTFISANI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02782 184 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 173 - -
Cca03g02782 184 Pfam PADRE domain 1 163 IPR025322 -
Cca03g02782 184 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02782 Cca-Chr3 49188142 49189336 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02782 - - gmx:100527719 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02782 03 49188142 49189336 Cca03g02782 03 49188142 49189336 ECH
Cca03g02782 03 49188142 49189336 Cca02g01274 02 30868451 30869124 PCT