Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02780 ATGGAGAGAAAAGAGGTAAAGGTAGTGGTGGGTGTGGATGAGAGCGAGGAGAGCATGTTTGCACTCTCTTGGTGTATCACCAACCTTGTTGCCGACACCCCCAACGTTAAACTACTCCTCCTCTATGTCAAGCCACCTCCTCCTGTCCACGCCTTCAATGCTGCTATATGGTACTTGTCTTCCACTAATGCTATCTCACCTATGGAAGAATACCGCAATGCTTTGGCTAATTCAGTAATGGAAAGAACTGAAGCCATCTGCAAGAACTTGAACACCACAAATGGGTGTGTGCAGATCAAAGTGGAGAAAGTAATAGGTGCAGTTCAAAAACTTAAGGCTGATACCTTGGTATTAGGAACACATGGATATGGATTCTTTAAGAGGGTGGTTGTTGGAAGTGTAAGTGATTATTGTGCCAGCCATGCAAAGTGTGCTGTTGTAATCGTGAAACAACCATAA 459 0.4423 MERKEVKVVVGVDESEESMFALSWCITNLVADTPNVKLLLLYVKPPPPVHAFNAAIWYLSSTNAISPMEEYRNALANSVMERTEAICKNLNTTNGCVQIKVEKVIGAVQKLKADTLVLGTHGYGFFKRVVVGSVSDYCASHAKCAVVIVKQP 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02780 152 Gene3D HUPs 1 152 IPR014729 -
Cca03g02780 152 CDD USP_Like 7 149 - -
Cca03g02780 152 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 151 - -
Cca03g02780 152 PRINTS Universal stress protein signature 110 122 IPR006015 -
Cca03g02780 152 PRINTS Universal stress protein signature 5 23 IPR006015 -
Cca03g02780 152 PRINTS Universal stress protein signature 128 150 IPR006015 -
Cca03g02780 152 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 151 - -
Cca03g02780 152 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 151 - -
Cca03g02780 152 Pfam Universal stress protein family 7 150 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02780 Cca-Chr3 49171058 49172074 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02780 - - gmx:100810564 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02780 03 49171058 49172074 Cca02g01425 02 32800725 32802035 ECH
Cca03g02780 03 49171058 49172074 Cca03g02780 03 49171058 49172074 ECH