Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02768 ATGCACCCAATATCATTATTCTTCGGCGATGCAGTGGGAACAAAACACGTTCAGATAGGTCCAGCAGAAGTGCCACAGCAGTCCAAACTCCAAAGTGTATATACACTTAGTTCTTTTTATTTCGAATGTCATCGAGAGAAGAAGAGATCCTCAAGCTCAACCTCTGAATTGACAAGCTTAAAGACAGGGAAGCAAATGGCTGGTCCTAGGATTGCTCATGCTACTTTGAAAGGACCAAGTGTTGTGAAGGAGATATGTGTTGGAATAATACTTGGTTTAGCTGCAGGCAGTGTCTGGAAGATGCATCACTGGAATGAACAGAGAAAGGCCAGGACATTTTATGATTTGCTGGAAAAGGGTGAGATTAGTGTTATTGCGGAGGAAGAATAA 390 0.4231 MHPISLFFGDAVGTKHVQIGPAEVPQQSKLQSVYTLSSFYFECHREKKRSSSSTSELTSLKTGKQMAGPRIAHATLKGPSVVKEICVGIILGLAAGSVWKMHHWNEQRKARTFYDLLEKGEISVIAEEE 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02768 129 MobiDBLite consensus disorder prediction 47 68 - -
Cca03g02768 129 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATED 38 129 - -
Cca03g02768 129 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATED 38 129 IPR008432 GO:0005746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02768 Cca-Chr3 49065751 49068527 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02768 - - gmx:100804495 138.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02768 03 49065751 49068527 Cca03g02768 03 49065751 49068527 ECH
Cca03g02768 03 49065751 49068527 Cca02g01283 02 30960501 30961973 PCT