Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01283 ATGGCTGGTCCTAGGATTGCCCATGCTACCTTGAAAGGCCCAAGTGTGGTCAAAGAGATATTAATTGGAATAACCCTCGGCTTAGCTGCTGGTGGTGTGTGGAAGATGCACCACTGGAATGAACAGAGAAAAACCAGGACCTTCTATGATTTATTGGAAAAAGGTGAGATCAGTGTTGTTGCAGATGAAGCGTGA 195 0.4564 MAGPRIAHATLKGPSVVKEILIGITLGLAAGGVWKMHHWNEQRKTRTFYDLLEKGEISVVADEA 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01283 64 PIRSF CX5C1 1 64 IPR008432 GO:0005746
Cca02g01283 64 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATED 1 63 IPR008432 GO:0005746
Cca02g01283 64 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATED 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01283 Cca-Chr2 30960501 30961973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01283 - - gmx:100500524 122.864
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02768 03 49065751 49068527 Cca02g01283 02 30960501 30961973 PCT