Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02745 ATGGTTGTGGCTTCTCCAAGTTGGAGGAAGAAAAGAAGAAGAATGAGAATCCCAACGATTGACCTATCGATGGAAAGGTCGGCGTTGTCGGAAGGAGTGGTAAAGGCGTGCGAGGAGTACGGTTTCTTCAAGGTGGTAAACCACGGTGTGGCGAAGGAGGTGATTTCGAGAATGGAAGAGGAGGGTGCAGAGTTTTTCGCCAAGCCCACCCACGAGAAGCGAAAAGCGGGCCCAGCCAGCCCTTTCGGTTACGGCTTCACCAATATCGGGCCCAACGGTGATATGGGTGACCTAGAGTATCTTTTGCTTCATGCCCATCCTCTTTCCGTCTCCCACAGATCCAAAACCATAGCTAACGACTCCACCAAGTTCAGTTGTGTTGTGAATGACTACGTGGAAGCCGTGAAAGAAGTGGCGTGCGAGATTGTAGATCTGGTGGCTGAGGGATTAGGGGTTTCAGACAAGTTTGCACTAAGCAGGCTCATCAGAGATGTCCACAGTGATTCAGTTCTGAGGATCAATCACTACCCTCCGTTGAATGTGAAGGTGAAGGGCAAGAAGAATAATAATAGCATTGGTTTTGGGGCACATTCTGACCCTCAGATCTTGACCATAATGCGATCCAACGACGTGGGTGGGCTTCAAATATACACTCGTGATGGGTTATGGATTCCTGTCCCCCCTGACTCCAATGAATTCTTTGTCATGGTTGGCGATGTCCTACAGGTTATGACGAATGGAAAGTTGATGAGCGTGAGGCATAGGGCATTGACGAACACGTGGAAGGGAAGGATGTCAATGATGTACTTTGCAGCACCACCCCTTGATTGGTGGATCACTCCGCTACCCGAGACGGTATCACCACCCCGAAATCCAATTCTATATAAGCCCTTCACGTGGGCCCAGTACAAGCAAGCAACATATTCATTACGCCTTGGAGATTCTCGACTTCACCTCTTCAAGGCCCATATAATTGCCTCCCCATCACAATTTCAATGTTGA 1002 0.491 MVVASPSWRKKRRRMRIPTIDLSMERSALSEGVVKACEEYGFFKVVNHGVAKEVISRMEEEGAEFFAKPTHEKRKAGPASPFGYGFTNIGPNGDMGDLEYLLLHAHPLSVSHRSKTIANDSTKFSCVVNDYVEAVKEVACEIVDLVAEGLGVSDKFALSRLIRDVHSDSVLRINHYPPLNVKVKGKKNNNSIGFGAHSDPQILTIMRSNDVGGLQIYTRDGLWIPVPPDSNEFFVMVGDVLQVMTNGKLMSVRHRALTNTWKGRMSMMYFAAPPLDWWITPLPETVSPPRNPILYKPFTWAQYKQATYSLRLGDSRLHLFKAHIIASPSQFQC 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02745 333 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 323 - -
Cca03g02745 333 Pfam non-haem dioxygenase in morphine synthesis N-terminal 17 90 IPR026992 -
Cca03g02745 333 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 273 IPR005123 -
Cca03g02745 333 Pfam 2OG-Fe(II) oxygenase superfamily 168 272 IPR044861 -
Cca03g02745 333 PRINTS Isopenicillin N synthase signature 33 50 - -
Cca03g02745 333 PRINTS Isopenicillin N synthase signature 197 218 - -
Cca03g02745 333 PRINTS Isopenicillin N synthase signature 233 259 - -
Cca03g02745 333 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 5 323 - -
Cca03g02745 333 Gene3D - 3 311 IPR027443 -
Cca03g02745 333 SUPERFAMILY Clavaminate synthase-like 10 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02745 Cca-Chr3 48827729 48833561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02745 6 321 Glycosyltransferase AT5G59530 27.439 5.94e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02745 K04125 - gmx:100777233 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02745 03 48827729 48833561 Cca03g02745 03 48827729 48833561 ECH
Cca03g02745 03 48827729 48833561 Cca02g01308 02 31305207 31309087 PCT