Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01308 ATGGTTGCGCCTAGTCCAACTTCCATGATGGTAAGAAGCAAGAAAACAAAGGCTATGGGGATTCCGACGATTGACCTTTCTATGGAAAGGTCAAAGTTGTCGGAAGAAGTGGTGAAAGCATGTGAGGAATATGGTTTCTTCAAGGTGGTGAACCACAGTGTGGCAAAGGAGGTTATTTCAAGATTGGAAGAGGAGGGAACAGAGTTTTTCTCGAAAAGCTCCTCGGAGAAGCGTCAAGCTGGCCCTGCCAACCCTTTTGGCTATGGCTGCAGAAACATTGGCCCCAATGGCGACATGGGTCACCTTGAGTATCTCCTCCTTCATACCAATCCTCTTTCCATATCCGAGAAATCCAAAACCATTGCAAACGACCCTACCAAGTTCAGTTGCGCCGTGAATGATTATATAGAAGCAGCTAAAGAACTAACATGTGAGATTCTTGATCTGGTGGCTGAGGGTTTGTGGGTCCAAGACAAGTCCTCACTGAGCAAGCTAATCAAAGACGTCCATAGTGACTCACTCCTCAGGATCAATCAATACCCTCCCGTGAGCCTAAAGGGCAACCACAATTGGGACACGTCCAAACCTGAGCAGAGCCAAaatactaataataataataataacaacaaCATTGGCTTTGGGGAGCATTCTGACCCTCAGATCTTAACCATCATGCGATCCAACGACGTCGGTGGCCTTCAGATTTCCACCCACGATGGCTTGTGGATTCCTGTCCCCCCTGACCCCAATCAATTCTTCGTTATGGTTGGTGACGCCCTTCAGGTTATGACAAATGGAAGGTTTGGGAGCGTGAGACACAGAGTATTGACCAACACAGCCAAGGCTAGAATGTCAATGATGTACTTTGCAGCACCACCGCTGAATTGGTGGATCACTCCACTGCCAAAGATGGTGACAGCCCACAATCCTAGTCTGTATAAGCCCTTCACATGGGCCCAATACAAGCAAGCTGCATACTCTCTCAGATTGGGAGACTCTCGCCTTGATCTCTTCAAGAAACAAGATACCCATCTCGAACCTGCTTCTTCTCCTTGA 1056 0.4697 MVAPSPTSMMVRSKKTKAMGIPTIDLSMERSKLSEEVVKACEEYGFFKVVNHSVAKEVISRLEEEGTEFFSKSSSEKRQAGPANPFGYGCRNIGPNGDMGHLEYLLLHTNPLSISEKSKTIANDPTKFSCAVNDYIEAAKELTCEILDLVAEGLWVQDKSSLSKLIKDVHSDSLLRINQYPPVSLKGNHNWDTSKPEQSQNTNNNNNNNNIGFGEHSDPQILTIMRSNDVGGLQISTHDGLWIPVPPDPNQFFVMVGDALQVMTNGRFGSVRHRVLTNTAKARMSMMYFAAPPLNWWITPLPKMVTAHNPSLYKPFTWAQYKQAAYSLRLGDSRLDLFKKQDTHLEPASSP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01308 351 Pfam 2OG-Fe(II) oxygenase superfamily 173 291 IPR044861 -
Cca02g01308 351 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 85 IPR026992 -
Cca02g01308 351 Gene3D - 2 329 IPR027443 -
Cca02g01308 351 PRINTS Isopenicillin N synthase signature 37 54 - -
Cca02g01308 351 PRINTS Isopenicillin N synthase signature 216 237 - -
Cca02g01308 351 PRINTS Isopenicillin N synthase signature 252 278 - -
Cca02g01308 351 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 170 300 IPR005123 -
Cca02g01308 351 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 341 - -
Cca02g01308 351 SUPERFAMILY Clavaminate synthase-like 7 332 - -
Cca02g01308 351 MobiDBLite consensus disorder prediction 186 213 - -
Cca02g01308 351 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 4 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01308 Cca-Chr2 31305207 31309087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01308 12 339 Glycosyltransferase AT5G59530 26.316 1.49e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01308 K04125 - gmx:100779525 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01308 02 31305207 31309087 Cca02g01308 02 31305207 31309087 ECH
Cca03g02745 03 48827729 48833561 Cca02g01308 02 31305207 31309087 PCT