Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02725 ATGAAATCAACAAATGTGAATGAATTACTAGGAAATCCTCAATTTCCTAAAAGTACACCGAAGGGATCCAGATTGAGTGAGGCTAGTGACATGGATGCTTTTGCAAAGAGCTTGTGTGGATGGAGTTGGGAGGAGAACAAATTGTTTGAGCTAGCTTTGGCAGTGGTAGATGAGCAACACCCTGAACGGTGGGAGGTGGTTGCAGCCCTTGTTGGAGGAGAAAAAAGTGCTGGAGATGTTCAAGAACATTATGTGATCCTTTTGGAGGATTTACACGTTATAGAATCTGGAAAACTTGACCATAAACTAGGAGAAGTTGTCCTTGTTGAGTGTAAGGAGTCCCTGTGCTTATCTCACAATGATACAAGCATCTAG 375 0.424 MKSTNVNELLGNPQFPKSTPKGSRLSEASDMDAFAKSLCGWSWEENKLFELALAVVDEQHPERWEVVAALVGGEKSAGDVQEHYVILLEDLHVIESGKLDHKLGEVVLVECKESLCLSHNDTSI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02725 124 SUPERFAMILY Homeodomain-like 41 96 IPR009057 -
Cca03g02725 124 MobiDBLite consensus disorder prediction 1 25 - -
Cca03g02725 124 Gene3D - 40 89 - -
Cca03g02725 124 PANTHER PROTEIN RADIALIS-LIKE 3 31 124 - -
Cca03g02725 124 MobiDBLite consensus disorder prediction 1 26 - -
Cca03g02725 124 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 31 124 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02725 Cca-Chr3 48596207 48598628 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02725 - - gmx:106798110 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02725 03 48596207 48598628 Cca02g01330 02 31654164 31656064 PCT