Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01330 ATGGTAATTCCTCAGAGTCATAGTCCTCTGAAGATGTCATACAGAACAAATGACATGGATGATTCTCCTAAGGGTTTGTGTGGGTGGAGTTTGAAGGAGAACAAATTGTTTGAGCTGGCTTTAGTAGTGGTAGATGAGAACCACCCAGAACTGTGGGAGGTTGTTGCAACCATGGTTGGAGGACAAAAGTGTATAGGGGATGTTCAAGAGCATTACGTGTCTCTTTTGAGGGATTTAAAGCTATAG 246 0.4268 MVIPQSHSPLKMSYRTNDMDDSPKGLCGWSLKENKLFELALVVVDENHPELWEVVATMVGGQKCIGDVQEHYVSLLRDLKL 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01330 81 Gene3D - 28 75 - -
Cca02g01330 81 PANTHER PROTEIN RADIALIS-LIKE 3 19 80 - -
Cca02g01330 81 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 19 80 IPR044636 GO:0003700
Cca02g01330 81 SUPERFAMILY Homeodomain-like 29 78 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01330 Cca-Chr2 31654164 31656064 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01330 - - var:108325196 108.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02725 03 48596207 48598628 Cca02g01330 02 31654164 31656064 PCT