Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02691 ATGGCAGACCATGATGCAAAAGAAGAACAAAGGCCACTCAACCAATGGAAGAGAAGCAAAGGAGGATTCAGGGCTTCTATGTTTATTTTCGTCTTGTCAGCATTGGACAACATGGGTTTTGTGGCAAACATGGTGAGCTTAGTCCTATACTTTTATGGAGTGATGCACTTTGATCTGTCAAGTTCAGCCAACACCCTCACAAACTTATTGGGTTCAACCTACTTGCTTTCCCTTGTTGGAGGCTTCATCTCAGATACTTACTTGAACAGATTCACCACATGCTTGCTTTTCGGATCACTCGAGGTTCTGGCTTTGGCAATGCTTACAGTTCAAGCTGCTTCAAATCATTTACACCCTGAAGCCTGTGGCAAGTCAAGCTGTGTGAAAGGTGGCATAGCAGTGATGTTCTACACATCACTGTGCATGTTGGCATTGGGAATGGGAGGGGTGAGAGGATCCATGACTGCATTTGGTGCTGACCAATTCGATGAGAAGGATCCAACTGAGGCAAAAGCTCTTGCAAGTTTCTTCAATTGGCTTTTGCTCAGTTCAACTGTGGGAGCAATCACAGGAGTCACTGGTGTTGTGTGGGTTAGCACACAAAAAGCATGGCATTGGGGATTTTTCATCATAACCATAGCTTCCTCTGTTGGCTTTGTGACCCTTGCTCTTGGAAAACCATTCTACCGCATCAAAACTCCAGGAGATAGCCCCACTTTGAGAATTGCTCAGGTAATTGTAGTGGCGTTTAAAAACCGAAAGTTGTCACTGCCGGAGTCACATGGAGAACTATATGAAATCAGTGATAAAGATGGTACGGTGGAGAAGATTGGCCACACCAATCAAATGAGGATTCTAGACAAAGCTGCCATTGTCCAAGAAAATTCAAAACCCCAAGCATGGAAGGTGTGTACAGTGACACAAGTCGAAGAAGTGAAGATCCTGACAAGAATGTTACCCATAGTAGCCAGTACCATTATACTGAACACATGCATGGCACAGCTCCAAACATTCTCAGTCCAACAAGGGAATGTAATGAACCTTAAACTTGGCTCTCTCACAGTGCCAGCACCATCCATTCCTGTCATCCCCCTTGTTTTCATAAGTGTCCTAGTCCCCATGTATGAGCTATTTTTTGTGCCATTTGCAAGAAAAATCACTCACCACCCATCAGGCATCACACAACTTCAAAGGGTGGGTGTAGGGTTGGTACTCTCAGCAATATCAATGGCAGTGGCAGGGATTGTGGAAGTGAAAAGAAGGGACCAAGGGAGAAAAGACCCTTCTAAGCCTATTAGCCTATTTTGGCTTTCTTTTCAGTATGGTATATTTGGCATTGCAGACATGTTCACTCTTGTGGGACTGTTGGAATTTTTCTATAGGGAATCACCTGCGAGCATGAAATCACTGTCAACCTCTTTCACGTGGTTGTCAACATCTCTTGGTTACTTCTTGAGCACCGTCTTTGTCAATGTCATCAATGCTGTTACCAAAAGGATCGCTCCTAGCAAACAAGGGTGGTTGCATGGCTTCGACTTGAACCAGAATAACCTTAACTTGTTCTATTGGTTCCTAGCCACCCTTAGTTGCCTTAACTTTTTTAACTACCTCTATTGGGCCTCACGCTACAAGTACAAATGTGAAGACTCGGGCCCGGGCTTTAAGCCCTTGGGTGAAGTGCCTCTCAAAAGTGAAGGCAATGTTAGAGAATGA 1713 0.4448 MADHDAKEEQRPLNQWKRSKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDLSSSANTLTNLLGSTYLLSLVGGFISDTYLNRFTTCLLFGSLEVLALAMLTVQAASNHLHPEACGKSSCVKGGIAVMFYTSLCMLALGMGGVRGSMTAFGADQFDEKDPTEAKALASFFNWLLLSSTVGAITGVTGVVWVSTQKAWHWGFFIITIASSVGFVTLALGKPFYRIKTPGDSPTLRIAQVIVVAFKNRKLSLPESHGELYEISDKDGTVEKIGHTNQMRILDKAAIVQENSKPQAWKVCTVTQVEEVKILTRMLPIVASTIILNTCMAQLQTFSVQQGNVMNLKLGSLTVPAPSIPVIPLVFISVLVPMYELFFVPFARKITHHPSGITQLQRVGVGLVLSAISMAVAGIVEVKRRDQGRKDPSKPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPASMKSLSTSFTWLSTSLGYFLSTVFVNVINAVTKRIAPSKQGWLHGFDLNQNNLNLFYWFLATLSCLNFFNYLYWASRYKYKCEDSGPGFKPLGEVPLKSEGNVRE 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02691 570 Pfam POT family 91 505 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca03g02691 570 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 555 - -
Cca03g02691 570 SUPERFAMILY MFS general substrate transporter 6 544 IPR036259 -
Cca03g02691 570 Gene3D MFS general substrate transporter like domains 2 550 IPR036259 -
Cca03g02691 570 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 555 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02691 Cca-Chr3 48202358 48206260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02691 17 550 Organic Solute Cotransporters AT1G69850 41.623 1.33e-145 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02691 K14638 - gmx:100781861 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02691 03 48202358 48206260 Cca02g01366 02 32111927 32115176 PCT