Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01366 ATGGGAGACAAGGAGGAAAAACAAGCCAAAAAGGGTGGATTCAGGGCTTCCATGTTTATCTTTGCGTTATCAACATTGGACAACATGGGTTGTGTGGCAAACATGGTCAGCTTAGTCCTATACTTTTACATGGTCATGCACTTTGATCTCGCCAGCTCAGCCGACACCCTCACAAACTTCTTGGGTTCAACTTTCTTGCTCTCCCTCGTTGGTGGCTTCATTTCGGACACTTACTTGAGCAGACTAACCACATGCCTGCTTTTCGGATCACTCGAAATTTTGGCTTTGGTGATGCTCACGGTTCAAGCTTCTCTGGACCATTTGCAACCACAGGCTTGTGGCAAGTCAAGCTGTGTTAAGGGTGGCATAGCTGTCATGTTTTACACATCATTGTATTTGTTGGCTTTGGGCATGGGAGGAGTAAGAGGCTCTATGGTGCCACTTGGTGCTGACCAATTTGATGAAAAGAATCCAAAAGAAGCAAAGGCTCTTTCTAGCTTCTTCAATTGGATTTTGCTCAGTTCAACCACGGGATCAATTGTAGGGGTCACTGGGGTTGTGTGGATCAGCACTCAAAAGGCTTGGCACTGGGGATTTTTGATAATAACCATAGCTTCCTCCATTGGCTTTCTGACCCTTGCTCTTGGCAAGCCATTTTACCGCATTAAAACCTCTTCTCAAAGCCCCCTTTCCACCATTGCGCAGGTTATTGTTGTGGCTATTAAAAACAGAAAGCTACCACTGCCAGAGTCTCATGAAGAACTTTATGAGGTGTGTGACGGTGCATCAGGGAAGATTGCACACTCCAACCAAATGAGGTTTCTAGATAAAGCAAGCATTCTTCAGGAAAACAATGAACCACGTGCATGGAAGGTGTGCACAGTGACACAAGTTGAAGAAGTGAAGATCTTAACAAGAATGCTACCTATATTAGCCAGTACTATTATAATGAACACTTGTTTAGCACAGCTCCAAACATTCTCGGTCCAGCAAGGGAATGTGATGAACCTGAAACTAGGTTCTTTTACAGTGCCTGCACCATCCATTCCTGTTATCCCCCTTCTTTTCTTGGCCATCCTCATTCCCTTCTATGAAATCGTCTTTGTGCCATTCGCACGAAAGATCACTCACCACCCTTCTGGCATTACACATCTTCAAAGAGTTGGTGTGGGGTTAGTACTTTCTTCCATTTCAATGGCAGTAGCTGGGATAGTAGAAGTGAaaagaaggaatcaaggaaggaaggaCCCCTCAAGGCCAATAAGTCTCTTTTGGTTATCCTTCCAATTTGCTATATTTGGAATTGCAGACATGTTCACTCTTGTAGGACTCCTAGAATTCTTCTACAGAGAAGCACCTGAAAACATGAAGTCACTATCAACTTCTTTCACATACTTGTCCATGTCTCTTGGCTACTTCTTGAGCACAATCTTTGTGGATGTCATCAATGCTGTTACCAAAAGGGTCACTCCAAGCAAAAAAGGGTGGTTGCATGGTTTGGACTTGAACAAAAATAATCTCAACTTGTTCTATTGGTTCTTAGCAATCCTAAGCTGTCTTAATTTCTTTAACTACCTTTACTGGGCCTCTTGGTACAAGTACAAAGCTGAGGACAGCAATGCAAAGGTGATTTTGAAGGTTGGTGAGAGAAAAGATGATGAGGAAGAAAAGATATGA 1677 0.427 MGDKEEKQAKKGGFRASMFIFALSTLDNMGCVANMVSLVLYFYMVMHFDLASSADTLTNFLGSTFLLSLVGGFISDTYLSRLTTCLLFGSLEILALVMLTVQASLDHLQPQACGKSSCVKGGIAVMFYTSLYLLALGMGGVRGSMVPLGADQFDEKNPKEAKALSSFFNWILLSSTTGSIVGVTGVVWISTQKAWHWGFLIITIASSIGFLTLALGKPFYRIKTSSQSPLSTIAQVIVVAIKNRKLPLPESHEELYEVCDGASGKIAHSNQMRFLDKASILQENNEPRAWKVCTVTQVEEVKILTRMLPILASTIIMNTCLAQLQTFSVQQGNVMNLKLGSFTVPAPSIPVIPLLFLAILIPFYEIVFVPFARKITHHPSGITHLQRVGVGLVLSSISMAVAGIVEVKRRNQGRKDPSRPISLFWLSFQFAIFGIADMFTLVGLLEFFYREAPENMKSLSTSFTYLSMSLGYFLSTIFVDVINAVTKRVTPSKKGWLHGLDLNKNNLNLFYWFLAILSCLNFFNYLYWASWYKYKAEDSNAKVILKVGERKDDEEEKI 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01366 558 PANTHER PEPTIDE/NITRATE TRANSPORTER 9 544 - -
Cca02g01366 558 Pfam POT family 84 496 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca02g01366 558 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 9 544 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca02g01366 558 Gene3D MFS general substrate transporter like domains 1 541 IPR036259 -
Cca02g01366 558 SUPERFAMILY MFS general substrate transporter 7 536 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01366 Cca-Chr2 32111927 32115176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01366 10 544 Organic Solute Cotransporters AT1G59740 42.701 1.29e-149 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01366 K14638 - gmx:100817702 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01366 02 32111927 32115176 Cca02g01366 02 32111927 32115176 ECH
Cca03g02691 03 48202358 48206260 Cca02g01366 02 32111927 32115176 PCT