Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02664 ATGGACAAGGTGACGAGGTTGGCCTCTGAAAAGGGTGTGGTGATTTTCACAAAGAGCTCTTGTTGCCTCTGCTATGCAGTCAACATTCTGTTTCATGAACTTGGGGTGAGGCCTGTGGTTCATGAGATTGACCATGACCCTGAAGGAAGAGAAATGGAGAAAGCACTATTGAGGTTAGGCTGCACTGCTCCAGTCCCAGCTGTGTTCATAGGAGGGAAGCTAATGGGATCCACCAACGAAATCATGTCCCTCCACCTAAGTGGTTCACTCACCCAAATGCTCAAGCCTTACCAGGCCTTATCTTGA 306 0.4869 MDKVTRLASEKGVVIFTKSSCCLCYAVNILFHELGVRPVVHEIDHDPEGREMEKALLRLGCTAPVPAVFIGGKLMGSTNEIMSLHLSGSLTQMLKPYQALS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02664 101 CDD GRX_GRXh_1_2_like 13 93 - -
Cca03g02664 101 Gene3D Glutaredoxin 1 101 - -
Cca03g02664 101 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Cca03g02664 101 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 100 - -
Cca03g02664 101 Pfam Glutaredoxin 13 74 IPR002109 -
Cca03g02664 101 PANTHER GLUTAREDOXIN 1 100 IPR011905 -
Cca03g02664 101 SUPERFAMILY Thioredoxin-like 1 99 IPR036249 -
Cca03g02664 101 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 100 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02664 Cca-Chr3 47951167 47951472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02664 1 100 Miscellaneous Gene Families AT4G15660 50.000 3.37e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02664 K03676 - gmx:100305984 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02664 03 47951167 47951472 Cca03g02664 03 47951167 47951472 ECH
Cca03g02664 03 47951167 47951472 Cca02g01198 02 29646937 29647785 PCT