Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02653 ATGGCTGAGATGACGAAGAATCAACCGTCACACTGGTGGTGGCTTGATAGCCACACCACTACTAAACGATCCCCATGGCTTCAATCCACTCTCTCTGAACTTAATGAGAAGACAACGGCAATGTTAAAATTAATTGAAGAAGATGCAGATTCCTTTGCCAAACGTGCAGAGATGTATTACAAGAAAAGACCAGAGCTTGTGAGAATGGTTGAGGATTTCTACAGGTCTCACCGTTCCCTAGCTGAGCGCTATGATCAAGTCAAACCTGATACTTATTCTGGGGGGTCACCTTTTGCTTCAGCCAAGTATCAGTTTGAGAAGTTGACGACTTTTTCAGATAATGGATTTGATACCTATTCTCATTCTGAGCATTGTGATGCATACGAGTCAGAGGAATCTGAAGTTGATGATCCTGAGCATGAGGAGGAAGAGGGTACCAAGTTTCTTCACAACTGCACAAAAGAGGACCATGTTTCGTTTGTGGCTGAGAGCGATGATGAAGTGATGAAGCTGAGGGATGAAATCAAGAAACTCAATGAAGAGAACATGGCTCATAGGGATCAAATCAAGCAGAAGGATACCATTTGCGATGAAGTGATGATGCTGAGGGAAGAAATGGAAAGGCTTAGAGATGAGAACGAGGCACAGAAGGAACAACTGAAGCAGAAGGATGAAGAGAAGATAGAGGTGATAAGACAGCTGAGTTTAGCAATAGATGTGCTGAAGCAGGAGAATGTGAAGATGAAAAACTTCATTGCTAAGGAGTCCTTCAAGAAATGGAAGAACCCATTTGAGATCAACAAAATTGTGGGAGCATTTTCGATGAAGTTGTTCAATGGTACTTCAAAGAATCAGCCCAGCGTTGAGCTCTCTAGATGTGGTTTACAAATTTAG 894 0.4239 MAEMTKNQPSHWWWLDSHTTTKRSPWLQSTLSELNEKTTAMLKLIEEDADSFAKRAEMYYKKRPELVRMVEDFYRSHRSLAERYDQVKPDTYSGGSPFASAKYQFEKLTTFSDNGFDTYSHSEHCDAYESEESEVDDPEHEEEEGTKFLHNCTKEDHVSFVAESDDEVMKLRDEIKKLNEENMAHRDQIKQKDTICDEVMMLREEMERLRDENEAQKEQLKQKDEEKIEVIRQLSLAIDVLKQENVKMKNFIAKESFKKWKNPFEINKIVGAFSMKLFNGTSKNQPSVELSRCGLQI 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02653 297 PANTHER PROTEIN NETWORKED 3A-RELATED 10 288 - -
Cca03g02653 297 Coils Coil 161 188 - -
Cca03g02653 297 Coils Coil 192 233 - -
Cca03g02653 297 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 91 IPR011684 GO:0003779
Cca03g02653 297 PANTHER PROTEIN NETWORKED 4A 10 288 - -
Cca03g02653 297 Pfam KIP1-like protein 12 85 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02653 Cca-Chr3 47879507 47883036 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02653 - - gmx:100815707 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02653 03 47879507 47883036 Cca03g02653 03 47879507 47883036 ECH
Cca03g02653 03 47879507 47883036 Cca02g01193 02 29535860 29539572 PCT