Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02514 ATGGCAAGAATGCCTATAGAGCCTCTAATAGTGGGAAGAGTCATAGGAGAAGTTCTTGATTCTTTCACCACAAGCATAAAAATGACTGTGAGTTACAACAAGAAGCAAGTCTACAATGGCCATGAGCTCTTCCCTTCCACTGTCAACACCATACCCAAGGTTGAGATTGATGGTGGTGATATGAGGTCCTTCTTCACACTGATCATGACAGACCCGGATGTTCCTGGCCCTAGTGATCCTTATCTGAGAGAGCACTTGCACTGGATAGTGACAGATATTCCAGGCACAACAGATGCCACATTTGGGTAA 309 0.4498 MARMPIEPLIVGRVIGEVLDSFTTSIKMTVSYNKKQVYNGHELFPSTVNTIPKVEIDGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFG 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02514 102 Gene3D - 2 102 IPR036610 -
Cca03g02514 102 PANTHER PROTEIN TERMINAL FLOWER 1 3 102 IPR031114 GO:0003712|GO:0009910
Cca03g02514 102 Pfam Phosphatidylethanolamine-binding protein 49 97 IPR008914 -
Cca03g02514 102 SUPERFAMILY PEBP-like 13 100 IPR036610 -
Cca03g02514 102 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 3 102 IPR035810 -
Cca03g02514 102 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02514 Cca-Chr3 46428257 46429947 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02514 K06910 - gmx:100776154 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02514 03 46428257 46429947 Cca03g02514 03 46428257 46429947 ECH
Cca03g02514 03 46428257 46429947 Cca02g00558 02 12239458 12240915 PCT