Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02465 ATGGGGGGTGAAAAGGTGAACGGGTCATGGTTCAGTACTTTGTGGCCAGTTTCTCGCAAGAGTGCATCAGATAACAAGGTAGTAGTTGGAGTTTTGGCATTAGAAGTTGCGGGGCTGATGTTGAAGGTGGTTAATTTATGGCAGTCTTTGAGTGATGGGGAGATGTTGAGTCTGAGGGAAGGGATAGTGAACTCAGTTGGAGTCAAAATGCTGGTGTCTGACAATGATGATTACTTGATGGAGCTTGCGTTGAATGAGATACTTGATAATTTTCAATCTCTGGCACGGTCTGTGGCTAGGTTGGGTAAGAAGTGTGTGGACCCAGTTTATCATCGTTTTGAATATTTTGTTCATAACCCAGCTCAAAATCACTTTCAATGGTCTGGGTGGGAGTATAGATGGAAAAAGATGGAGAGGAAAGTGAAGAAAATGGAAAAATTTGTTGCCGCTATGACACAGTTTTCCCAAGAGCTCGAGGTGCTAGCAGAGGTTGAACAGACTTTCAGGAGAATGCAGGCGAATCCAGAATTGCATCTGGTGAAATTGCTTGAGTTTCAGAAAAAGGTCATGTTACAGCGCCAGGAAGTGAGGAGTCTCAAGGACATGTCTCCATGGAATAGAAGTTACGATTATGTTGTCCGGTTGTTGGCGAGATCACTATTTACAATACTGGAGAGGATCATACTTGTCTTTGCAAACTGTCACCCACCAACTGTACAACAACAGAATGAATCCCTGCATATGAATGCTAACAATCTTAATCGAAGTCATTCCTTTTCTGTTATGCATTCTTCTGTTCATCCTTCAGAGCATGATTTCTATGGCTTCAATTCAGGACCTGTCGGGGGGAGGCCAGTGTCCAACTCGGGCTTTTTAGTTGACAAGGGCAAGAGAAAGAAGAAACAGCAGCATACCGTTCATGAACCAGCTTTAAGCAGAAAGAATCCACATTCAGAAAGCAAGCAGTTAGGACATATTGTGGCCTTCAAAGGTTGTATGTCTTCTGCAAACAATTCTCCTGTCATACAGAGCTGCATGCAGACAAATGGTGGTTCCATGCGGTTGACTGATTGTCATTTGAAGTCCATTGATAAAATGAAAACAGTGGATAACTTTTCTCTCTCCAACAGAATTAGAATATATTCTAGATTATCCATCAAGAACAAGCTAAAACCAGCTACACTTACCCTTGGTGATGCGGCTCTAGCCCTGCATTATGCAAATATGATTGTATTGATTGAAAGGATGGTGTCATCACCTCACCTGGTTGATCTTGCAACAAGAGATGATCTGTACAATATGCTTCCAACTACTATAAAAACTGCTCTGAGGGCTAAGCTTAAGTGCCATGCAAAAAGTAAATCTTCTGTTCGTCATGATGCAAACCTTGCTGCTGAATGGAGTCCGGTGCTTGCACAGATATTGGAATGGTTGGCTCCACTGGCACATAACATGATAAGTTGGTATTCTGATAGAAATTTTGAGAAGGAGCACTCAATTTTGAACGCAAAGGTGTTACTTGTCCAAACTCTTTACTTTGCAAATCAAGCTAAAGCTGAGGCTGCAATAGTTGATCTTCTTGTAGGTCTCAACTATGTGTGTAGCATTGATACAAGAGTTGGCACAAGAGGTGCATTAGATTGTGCTAGAACTAGATCTTTTAATGCAATGTACAATGAATTTTCATAG 1689 0.4168 MGGEKVNGSWFSTLWPVSRKSASDNKVVVGVLALEVAGLMLKVVNLWQSLSDGEMLSLREGIVNSVGVKMLVSDNDDYLMELALNEILDNFQSLARSVARLGKKCVDPVYHRFEYFVHNPAQNHFQWSGWEYRWKKMERKVKKMEKFVAAMTQFSQELEVLAEVEQTFRRMQANPELHLVKLLEFQKKVMLQRQEVRSLKDMSPWNRSYDYVVRLLARSLFTILERIILVFANCHPPTVQQQNESLHMNANNLNRSHSFSVMHSSVHPSEHDFYGFNSGPVGGRPVSNSGFLVDKGKRKKKQQHTVHEPALSRKNPHSESKQLGHIVAFKGCMSSANNSPVIQSCMQTNGGSMRLTDCHLKSIDKMKTVDNFSLSNRIRIYSRLSIKNKLKPATLTLGDAALALHYANMIVLIERMVSSPHLVDLATRDDLYNMLPTTIKTALRAKLKCHAKSKSSVRHDANLAAEWSPVLAQILEWLAPLAHNMISWYSDRNFEKEHSILNAKVLLVQTLYFANQAKAEAAIVDLLVGLNYVCSIDTRVGTRGALDCARTRSFNAMYNEFS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02465 562 Pfam Protein of unknown function (DUF668) 396 486 IPR007700 GO:0045927
Cca03g02465 562 PANTHER BNAC09G50660D PROTEIN 4 557 - -
Cca03g02465 562 MobiDBLite consensus disorder prediction 305 320 - -
Cca03g02465 562 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
Cca03g02465 562 PANTHER PLANT/T32M21-140 PROTEIN 4 557 - -
Cca03g02465 562 MobiDBLite consensus disorder prediction 288 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02465 Cca-Chr3 45745447 45747836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02465 - - gmx:100809482 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02465 03 45745447 45747836 Cca03g02465 03 45745447 45747836 ECH
Cca03g02465 03 45745447 45747836 Cca02g00510 02 10852030 10853730 PCT