Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00510 ATGGGGGGTGAGACGGTGAATGGGACATGGCTCAGTGCATTGTGGCCAATCTCACGCAAGAGTGTATCAGATGGCAAGGATGTGATTGGAATTTTGGCATTTGAAGTTACGGGTTTGATGTCTAAGGTGGCTAATTTATGGCATTCTTTGAGTGACAGGGAGGTAATGAAAACGAGGGAATGGATAGTGAAGTCGGTTGGGGTCCAAATGCTAGTGTCTGATGATCATTGTTTCTTGATGGAACTAGCACTGAGTGAGATTCTCAATAACTTTGAGTCTCTAGCATGGTCTGTGGCCAGGTTGAGTAAGAGGTGCAGGGATCCAGTGTATCGTGGTTATGAACATTTTGTCCTCAACCCTGCTCAACATTATGTTCAATGGTGTGGGTGGGAATATGCATGGAAAAAGATGGAGAGGAGGGTGAAGAAAATGGAAAGATTTGTTGCTGCTATGTCACTGCTGTCCCAAGAGCTTGAGGTACTGGCTGAGAGAGAACAAACTTTCAGGAGAATGAAGGCGAATCGCGAGGTTCATGGTGTGAAATTGCTTGAGTTTCACAAGAGGGTCATGTGGCAGCGCCAGCAAGTGAAGAATCTGAGAGACATGTCTCCTTGGAACAGAAGTTATGACTACATTGTCCGGTTATTGGCAAGATCATTGTTCACAATTCTGGAGAGAATCATTCTTGTTTTTGGAAATAGTCACGTACCACCAATTGAAAACCAACAAAATGATTCTCCCCCTGTGAACACTAATAACAACCATCTCACTCGCAGTCATTCCTTCTCTACTCTCATGCATTCTTCATTTAATCCTTTCAAGACTAATTCACATGGATTCTGTTCAGAACCTGTTGAGTGCAAACCAAAGTTAAACTCAGGGTTTGTACTTGAcaagaccaagagcaagagaaagaagaaagagcaaCAAGTGCTTCATTCAGAAAGCAAGCATTGCAAACCTGTTGGTCCATTAAAAGGATGCATATCAGTTGGAAACAATTCTCCTATTGTACTACAAACTTGTGTGCCAACTAGTGGTGGCTCCATGAGGGTGGTTGATTGTCATGTGAAGAACATTGATAACATGAAACCAATGGATAAATTATCCCTCATATGGAGAACTAGAATTTATTTCAAACTATCTGTAAAGGGTCGGTTAAAGGCAGGTCCATCTACCCTTGGTGGTGCAGCTTTAGCTCTACATTATGCAAATGTGGTAGTACTAATAGAGAAGATGGTGTCATCACCTCACCTCATTGATCTTAAAACAAGGGATGAGTTGTACAACATGTTACCAACAAACATGAGAACCGCTCTGAGGGGTAAGCTTAAGTGGTACGCCAAGAGCAAGCGTGCCACAGTCCATGAAGCTAGCCTTGCAGTGGAATGGAGCATGATGCTCTCACATATATTGGAGTGGTTGGCTCCACTTGCACACAACATGATAAAGTGGCATTCTGTGAGGAATTTTGAGAGGGAGCAATCATCTTCCAAAGCAAATGTTTTGCTTGTGCAGACTCTTTACTTTGCAAACCAAGCAAAAGCTGAAGCTGCAATGGTTGAACTCCTTGTTGGTCTCCACTATGTGTGTAGGATTGATAGAGAGGCTTGCATGAGAGAGGCACACGAGTTTTCAGGGTCTAGATCTTCTAACGGTGTTCGTTTGAGAAAGAATGAGTTGTACAATAAATATTTATAG 1701 0.4186 MGGETVNGTWLSALWPISRKSVSDGKDVIGILAFEVTGLMSKVANLWHSLSDREVMKTREWIVKSVGVQMLVSDDHCFLMELALSEILNNFESLAWSVARLSKRCRDPVYRGYEHFVLNPAQHYVQWCGWEYAWKKMERRVKKMERFVAAMSLLSQELEVLAEREQTFRRMKANREVHGVKLLEFHKRVMWQRQQVKNLRDMSPWNRSYDYIVRLLARSLFTILERIILVFGNSHVPPIENQQNDSPPVNTNNNHLTRSHSFSTLMHSSFNPFKTNSHGFCSEPVECKPKLNSGFVLDKTKSKRKKKEQQVLHSESKHCKPVGPLKGCISVGNNSPIVLQTCVPTSGGSMRVVDCHVKNIDNMKPMDKLSLIWRTRIYFKLSVKGRLKAGPSTLGGAALALHYANVVVLIEKMVSSPHLIDLKTRDELYNMLPTNMRTALRGKLKWYAKSKRATVHEASLAVEWSMMLSHILEWLAPLAHNMIKWHSVRNFEREQSSSKANVLLVQTLYFANQAKAEAAMVELLVGLHYVCRIDREACMREAHEFSGSRSSNGVRLRKNELYNKYL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00510 566 PANTHER PLANT/T32M21-140 PROTEIN 3 561 - -
Cca02g00510 566 PANTHER BNAC09G50660D PROTEIN 3 561 - -
Cca02g00510 566 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
Cca02g00510 566 Pfam Protein of unknown function (DUF668) 393 484 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00510 Cca-Chr2 10852030 10853730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00510 - - gmx:100804666 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00510 02 10852030 10853730 Cca02g00510 02 10852030 10853730 ECH
Cca03g02465 03 45745447 45747836 Cca02g00510 02 10852030 10853730 PCT