Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02417 ATGTCTGGCTCCGTGGCTATAGCTGATTATTCAAATGGAGGAGCACTTTCTTGTGCAGAGAGAACAAAATCTGTTGATGCCATTCCTGAATTAGACCATCCGTCTACATTGACAAACGGTGAAACTGATGGGTTTAGTGAAGGACAAGTCTTACTTTCCAATGGAGAGTTATATTCTGGGTCCCTTTATGGCAACGTTTCTGAGGGCCATGGGACATACGTGTGGTGTGATGGTTGTGTATACGAGGGTGAATGGAGGAGAGGGATGAGAAATGGGTATGGAAAAATAAGATGGCCTTCTGGAGCAGTGTATGAAGGTGAATTCTCTGGTGGATATATCCATGGTACGGGAACGTATATTCGTTCTGATAAATTGACTTATAAAGGTAGATGGCGGTTGAATCTTAAACATGGTTTGGGTTACCAAGTTTATCCTAATGGAGATACCTTTGAAGGGTCTTGGATGCAAGGAACACCAGAGGGGCCTGGCAAGTATACTTGGACCAATGGAAATGTGTATTTGGGGAATATGAAAGGTGGCACAATGTCAGGAAAAGGAACTCTCACTTGGATAAATGGGGACTCATATGAAGGAAACTGGTTAAATGGCGTGATGCATGGGTTTGGAGTGTATACTTGGAGTGATGGAGGATGCTATGTTGGGACTTGGACATTTGGTCTAAAAGATGGCAAAGGAACCTTTTATCCAAGGGGTAGTAATCTTCCATCAGTCCAAGAAATTTACCTCAATGCCTTGAGGAAAAGAGGGTTATTGCCGGATTTGAGAAAACAAAACCAGGTGAGAGATGTCAAGGTCTCAGAAAGAAATGTTTCATCTGATAGAAGAAATGTTTCTCTTGAAAGGCGTTGGAGTCTTGAGGTGTCTATTGAGAAAGTGATTGGATATGATTCGGCAGAATCTGTGCAAGAAAGTAGAGACAAAGAGGTTGATGCAACGATCCCAATTTTGGAACGGGAGTACATGCAAGGTGTATTGATGAGTGAGGTTGTGTTAAATAATATGTTTTCATCTATGTCTAGAAGGGCACGACGACTTCAAAAAAAGCTTGCCAAAGATATTAAAAGACCTGGGGAAGCAATCATTAAAGGTCACAGGAGTTATGATCTAATGCTCAATTTGCAGCTTGGAATAAGGTATACTGTGGGCAAGATAACACCTATACCAACCCGAGAAATTAGAGCATCAGATTTTGGTCCCAAAGCAAGCTTTTGGATGGATTTTCCTAAAGAAGGTTCTCAATTAACACCTACTCATCAATCAGAGGATTTTAAATGGAAAGATTATTGCCCCATGGTTTTCAGAAATTTGAGAGAGTTGTTCAAGATTGATGCCGCTGACTACATGATGTCCATTTGTGGAAATGATACTTTGAGAGAACTGTCTTCTCCGGGGAAAAGTGGTTGTGTCTTCTTCCTGTCTCAGGATGATCGTTTCATGATCAAGACGCTGCGAAAATCTGAAGTCAAGGTTCTTCTAAGAATGCTTCCAGACTATCATCATCATGTGAAGTCATATGAAAATACACTTATCACAAAATTTTTTGGCCTGCACCGGATTGAACCTTCAAGTGGTCAAAAGTTTTGCTTTGTTGTAATGGGAAATATGTTCTGCACGGAATTAAGGATCCATCGGAGATTTGATTTAAAAGGTTCGTCCCTTGGACGATCATCAGACAAGATAGAAATCGACGAGAATACCACACTCAAAGATTTGGATCTGAACTACTGCTTCTACTTGGAACCGTCTTGGCGGGAGTCTTTATTAAAGCAGATCGAAATAGACAGCAAATTTTTGGAAGCACAGCACATAATGGATTACAGCCTTCTTCTAGGTGTTCACTATCGAGCTCCCCAGCATCTGCGTCCTCTCATATCATACAGCCAAAGAAGAAGTGTGGATGGATTAGCAATGCTTGCAGAGGAAGACCCACTGGAGGATGAAGTATCCTATCCACAAGGCCTTGTTCTAGTTCCCCGAGGAGCAGATGATAACAGTGTTGTTGTTGGTTCACACATGAGAGGCAGCAGGTTGCGAGCTTCATCTGCTGGTGATGAGGAGGTGGATCTACTTCTACCTGGTACAGCAAGACTCCAAATCCAGCTAGGTGTGAACATGCCATCAAGGGCAGAACGGATTTCAGGAAAACGAGAAAAGCAGATGTTCCATGAGGTGTACGATGTGGTACTGTACCTGGGTATCATTGACATTTTGCAGGATTACAACATGACTAAGAAGATTGAACATGCTTATAAATCTCTTCAGTTTGATTCATTGTCTATCTCAGCTGTGGACCCTACGTTCTACTCCCGTCGCTTCCTGGAATTTATTCAGAAAGTGTTTCCGCCAAATACAATGTCAGTTAATTAA 2388 0.4192 MSGSVAIADYSNGGALSCAERTKSVDAIPELDHPSTLTNGETDGFSEGQVLLSNGELYSGSLYGNVSEGHGTYVWCDGCVYEGEWRRGMRNGYGKIRWPSGAVYEGEFSGGYIHGTGTYIRSDKLTYKGRWRLNLKHGLGYQVYPNGDTFEGSWMQGTPEGPGKYTWTNGNVYLGNMKGGTMSGKGTLTWINGDSYEGNWLNGVMHGFGVYTWSDGGCYVGTWTFGLKDGKGTFYPRGSNLPSVQEIYLNALRKRGLLPDLRKQNQVRDVKVSERNVSSDRRNVSLERRWSLEVSIEKVIGYDSAESVQESRDKEVDATIPILEREYMQGVLMSEVVLNNMFSSMSRRARRLQKKLAKDIKRPGEAIIKGHRSYDLMLNLQLGIRYTVGKITPIPTREIRASDFGPKASFWMDFPKEGSQLTPTHQSEDFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDTLRELSSPGKSGCVFFLSQDDRFMIKTLRKSEVKVLLRMLPDYHHHVKSYENTLITKFFGLHRIEPSSGQKFCFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYCFYLEPSWRESLLKQIEIDSKFLEAQHIMDYSLLLGVHYRAPQHLRPLISYSQRRSVDGLAMLAEEDPLEDEVSYPQGLVLVPRGADDNSVVVGSHMRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPSRAERISGKREKQMFHEVYDVVLYLGIIDILQDYNMTKKIEHAYKSLQFDSLSISAVDPTFYSRRFLEFIQKVFPPNTMSVN 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02417 795 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 370 787 IPR002498 GO:0016307|GO:0046488
Cca03g02417 795 PIRSF PIP5K_plant 15 791 IPR017163 GO:0005524|GO:0016308
Cca03g02417 795 SMART morn 125 146 IPR003409 -
Cca03g02417 795 SMART morn 79 100 IPR003409 -
Cca03g02417 795 SMART morn 56 77 IPR003409 -
Cca03g02417 795 SMART morn 148 169 IPR003409 -
Cca03g02417 795 SMART morn 102 123 IPR003409 -
Cca03g02417 795 SMART morn 171 192 IPR003409 -
Cca03g02417 795 SMART morn 217 238 IPR003409 -
Cca03g02417 795 SMART morn 194 215 IPR003409 -
Cca03g02417 795 CDD PIPKc_AtPIP5K_like 373 786 - -
Cca03g02417 795 SMART PIPK_2 400 788 IPR002498 GO:0016307|GO:0046488
Cca03g02417 795 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 279 791 IPR023610 -
Cca03g02417 795 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 40 271 IPR023610 -
Cca03g02417 795 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 279 791 - -
Cca03g02417 795 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 40 271 - -
Cca03g02417 795 Pfam MORN repeat 219 238 IPR003409 -
Cca03g02417 795 Pfam MORN repeat 196 217 IPR003409 -
Cca03g02417 795 Pfam MORN repeat 81 102 IPR003409 -
Cca03g02417 795 Pfam MORN repeat 58 80 IPR003409 -
Cca03g02417 795 Pfam MORN repeat 150 172 IPR003409 -
Cca03g02417 795 Pfam MORN repeat 173 194 IPR003409 -
Cca03g02417 795 Pfam MORN repeat 127 149 IPR003409 -
Cca03g02417 795 Pfam MORN repeat 104 123 IPR003409 -
Cca03g02417 795 SUPERFAMILY SAICAR synthase-like 369 787 - -
Cca03g02417 795 Gene3D - 83 136 - -
Cca03g02417 795 Gene3D - 202 245 - -
Cca03g02417 795 Gene3D - 152 201 - -
Cca03g02417 795 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 359 541 IPR027484 -
Cca03g02417 795 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 53 180 - -
Cca03g02417 795 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 459 785 IPR002498 GO:0016307|GO:0046488
Cca03g02417 795 Gene3D - 542 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02417 Cca-Chr3 45250029 45256865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02417 14 793 Acyl Lipid Metabolism Gene Families AT3G09920 72.426 0.0 1196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02417 K00889 - gmx:100800418 1482.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02417 03 45250029 45256865 Cca03g02417 03 45250029 45256865 ECH
Cca03g02417 03 45250029 45256865 Cca02g00463 02 9814369 9822196 PCT