Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00463 ATGTCTGGCCCTGTGGCCACAGTTGGTAATTTGGATGGAGCACTTCCTTGGGCAGAGAGAACAAAATCTCTTGATGCCATTTCTGAAATAGACCGTATATCTATACTGACAAACGGTGAAGCTGGTCATTCCTCTGAAGTTGCTGGCTTTAGAGTAGGGGAACTCTTACTTCCTAATGGAGAATCATATTCTGGGTCACTTCTTGGCAATACTCCAGAGGGTCATGGTAAATATGTATGGTCAGATGGTTGTGTATATGAGGGTGAGTGGAGACGGGGGATGAGAAATGGACTTGGGAAAATGCAATGGCCTTCTGGAGTAATGTATGAGGGTGAGTTCTCAGGTGGCTATATCCATGGTACAGGAGCATATATTGGCCCTGATAATCTAACCTACAAAGGTCGGTGGCGGTTGAATCTTAAACATGGGTTGGGTTATCAAATTTATTCAAATGGAGATATCTTTGAAGGCTCTTGGATCCAAGGAACACCAGAGGGGCCAGGCAAGTATACCTGGGCCAATGGAAATGTATATTTGGGAAATATGAAAGGTGGGAAAATGTCAGGAAAGGGAACTCTCACCTGGGTAAATGGAGACTCGTTTGAAGGAAGCTGGTTAAATGGCATGATGCATGGGCTTGGGGTATATACATGGAGTGATGGAGGCTGCTATGTTGGGACTTGGACACGGGGTCTGAAAGATGGCAAAGGAACCTTCTATCCTAAAGGTAGCTGTCTTCCATCTGCACAAGAAATATATCTCAATGCATTGAGAAAGAGAGGGCTGTTGCCAGATTTAAGAAAACAGAACCAGATACATATTCATCATGCTGCTTCAGTTGATATGGGAGATGTCAAGGTTGGGGAGAGTCAGAGATCAAATCGTGTTTCTGATAAGCTAGGCAAAGGAAACCTGTTAAATCTGGAACAATCTCGCAGCAAAAATATTTCTCTTGAAAGGCGCTGGAGTCTTGAGGTATCTATTGAGAAAGTGATTGGGCATGATTCAAAATTAGGTTCAACAGATTCTTTTGCAGAAAATGGGGATAAAGAGGTTAATGCTAAGATCCCAATTTTGGAACGTGAGTATATGCAAGGTGTATTAATAAGTGAGTTGGTTTTAAATAATAGTTTTTCATCAATGTCTAGAAGGGCCAAACAGCTTCAAAAAAAACTTGCCAAAGATATTAAAAGACCTGGTGAAGCAATCATTAAAGGTCACCGCAGCTATGATCTGATGCTTAGTTTGCAGCTTGGAATAAGGTATACCGTGGGAAAGATTACACCAATACAGAGACGAGAAGTTCGAGCATCAGATTTTGGTCCTAGAGCAAGCTTTTGGATGAATTTTCCTAAAGAAGGTTCTCAATTAACACCTCCACATCAATCAGAGGATTTTAAATGGAAAGATTACTGCCCTATGGTATTCAGAAATTTGAGAGAGTTGTTCAAGATTGATGCTGCTGACTATATGATGTCCATTTGTGGGAATGATGCTCTGAGGGAACTGTCTTCTCCAGGGAAAAGTGGGAGTGTCTTTTTCCTGTCTCAGGATGATCGATTCATGATTAAGACACTGCGAAGATCTGAAGTAAAGGTAGTTCTTCTAAGAATGCTTCCAGACTATCATCATCATGTGAAGACTTATGATAACACACTCATCACAAAATTTTTTGGTCTGCACAGGATTATACCTTCGAGTGGTCAAAAGTTTCGCTTTGTCGTAATGGGAAATATGTTCTGCACAGAATTAAGGATCCATAGGAGATATGATTTGAAAGGTTCATCTCTTGGACGTTCTTCAGACAAGATAGAAATTGATGAGAACACCACTCTTAAAGATTTGGATTTGAACTACTGCTTTTACTTGGAACCATCTTGGCGGGAGTTTTTATTAAAACAGATTGAGATTGACAGCAAGTTCTTAGAATTACAACAGATAATGGATTACAGCCTCCTTCTAGGTGTTCATTATCGAGCTCCCCAGCAGCTGCATCCTCTGCCGCCATACAACCAGAGTTTAAGTGCAGATGGATTGGCAATTCTTGCCGAGGAAGACCCTCTAGAGGATGAAGTATCCAATTATCCCCAAGGGCTTGTTCTGGTCCCTCGAGGTGCAGATGATAATAGTGTTGTTGTAGGGTCACACATTAGGGGTAGAAGATTGCGAGCTTCAGCTGCCGGGGACGAGGAGGTGGATCTACTTCTACCCGGTACAGCAAGACTACAAATCCAGCTAGGTGTGAACATGCCTGCTAGGGCAGAGCAGATTCCGGGAAAAAAGGAAGTGCAAATGTTCCATGAGGCTTACGATGTCGTACTTTACCTGGGTATAATTGACATATTGCAAGAGTACAACATGACCAAGAAGATTGAACATGCATATAAATCTTTTCAGATGAAGTTTGGGGCTAACCTCAACCTGTTAGTTTATTCAGAAAATAAACATTGGAGCAAAACAAGAAACATGCAGAAGCTCTAG 2481 0.4176 MSGPVATVGNLDGALPWAERTKSLDAISEIDRISILTNGEAGHSSEVAGFRVGELLLPNGESYSGSLLGNTPEGHGKYVWSDGCVYEGEWRRGMRNGLGKMQWPSGVMYEGEFSGGYIHGTGAYIGPDNLTYKGRWRLNLKHGLGYQIYSNGDIFEGSWIQGTPEGPGKYTWANGNVYLGNMKGGKMSGKGTLTWVNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTFYPKGSCLPSAQEIYLNALRKRGLLPDLRKQNQIHIHHAASVDMGDVKVGESQRSNRVSDKLGKGNLLNLEQSRSKNISLERRWSLEVSIEKVIGHDSKLGSTDSFAENGDKEVNAKIPILEREYMQGVLISELVLNNSFSSMSRRAKQLQKKLAKDIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRASDFGPRASFWMNFPKEGSQLTPPHQSEDFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVVLLRMLPDYHHHVKTYDNTLITKFFGLHRIIPSSGQKFRFVVMGNMFCTELRIHRRYDLKGSSLGRSSDKIEIDENTTLKDLDLNYCFYLEPSWREFLLKQIEIDSKFLELQQIMDYSLLLGVHYRAPQQLHPLPPYNQSLSADGLAILAEEDPLEDEVSNYPQGLVLVPRGADDNSVVVGSHIRGRRLRASAAGDEEVDLLLPGTARLQIQLGVNMPARAEQIPGKKEVQMFHEAYDVVLYLGIIDILQEYNMTKKIEHAYKSFQMKFGANLNLLVYSENKHWSKTRNMQKL 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00463 826 SMART PIPK_2 436 809 IPR002498 GO:0016307|GO:0046488
Cca02g00463 826 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 14 800 - -
Cca02g00463 826 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 406 826 IPR002498 GO:0016307|GO:0046488
Cca02g00463 826 Gene3D - 579 811 - -
Cca02g00463 826 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 495 800 IPR002498 GO:0016307|GO:0046488
Cca02g00463 826 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 14 800 IPR023610 -
Cca02g00463 826 SMART morn 153 174 IPR003409 -
Cca02g00463 826 SMART morn 61 82 IPR003409 -
Cca02g00463 826 SMART morn 107 128 IPR003409 -
Cca02g00463 826 SMART morn 199 220 IPR003409 -
Cca02g00463 826 SMART morn 84 105 IPR003409 -
Cca02g00463 826 SMART morn 130 151 IPR003409 -
Cca02g00463 826 SMART morn 222 243 IPR003409 -
Cca02g00463 826 SMART morn 176 197 IPR003409 -
Cca02g00463 826 CDD PIPKc_AtPIP5K_like 409 799 - -
Cca02g00463 826 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 58 185 - -
Cca02g00463 826 Pfam MORN repeat 63 85 IPR003409 -
Cca02g00463 826 Pfam MORN repeat 224 244 IPR003409 -
Cca02g00463 826 Pfam MORN repeat 155 177 IPR003409 -
Cca02g00463 826 Pfam MORN repeat 178 199 IPR003409 -
Cca02g00463 826 Pfam MORN repeat 132 153 IPR003409 -
Cca02g00463 826 Pfam MORN repeat 201 222 IPR003409 -
Cca02g00463 826 Pfam MORN repeat 109 129 IPR003409 -
Cca02g00463 826 Pfam MORN repeat 86 106 IPR003409 -
Cca02g00463 826 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 395 578 IPR027484 -
Cca02g00463 826 Gene3D - 207 247 - -
Cca02g00463 826 Gene3D - 157 206 - -
Cca02g00463 826 Gene3D - 88 140 - -
Cca02g00463 826 PIRSF PIP5K_plant 13 804 IPR017163 GO:0005524|GO:0016308
Cca02g00463 826 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 172 244 - -
Cca02g00463 826 SUPERFAMILY SAICAR synthase-like 405 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00463 Cca-Chr2 9814369 9822196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00463 10 800 Acyl Lipid Metabolism Gene Families AT3G09920 74.023 0.0 1216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00463 K00889 - gmx:100805371 1503.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00463 02 9814369 9822196 Cca02g00463 02 9814369 9822196 ECH
Cca03g02417 03 45250029 45256865 Cca02g00463 02 9814369 9822196 PCT