Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02385 ATGGTTTTATATGAGCATTCAGATGTATTTCAGTGGGGTCTTAATCTTCTTGAGGGTGACCCTGCTTATAATCCTGGATATTATGGTAACATAATTCAGCATGATACTGGTGACATCTATAATGGAGACTACTTCCATAACCATTATGATAATGAATGTAACCAAATAGAGAATGATGAGATCATTGCCCGTACACTTCAAGAGGAGTTTTCACAGCTGGACATTGCTGAACCTACAGGATACTTACAGGCAGGTGAAGAACAGTTCCATGTTTCTGAGACCGAGCATACATATGATAATGGTTGGCAAAACTCTTCAATGATGCACTATTGTTCAGGAGGTCACGATTATGTCCAAGAAGGAACTGGTGATGAAGAACCCTCTAGTTCATGTTCTAGTCCTGGTGAAACGGAGGAATATTCATTAGAGATTACTGACAATTATCCACTTGATGATGAAGTTGGGAGGAAATTGAGTCAAATGATACCAATTCCTCATGTTCCAAAAATTAATGGTGAAATTCCTTCAATTGATGAAGCAACTTCAGATCATCAAAGGCTGCTGGATAGATTGCAGTTATATGACTTTGTGGAGCACAGAGTACAAGGTGATGGTAATTGTCAGTTCCGGGCACTATCTGATCAATTGTATAACGCACCTGATCAACACAAGTTTGTGAGACGACAAGTTGTCAATCAGCTCAAATCTAATCCAGAGATTTATGATGCATATGTTCCGATGGAATATGATGACTATTTGAACAAGATGTCCAAGAGTGGAGAATGGGGTGATCATGTCACTCTCCAAGCTGCTGCAGATTCGTATGGTGTGAGAATATTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAAGCCAAAAGGAGTGATTTTCTTGAGTTTTTGGGCAGAGGTGCATTACAACTCCATTTATCCCCAAGGAGATATAGCTTCGAGTGAGTCTAGAAAGAAGAAAAGGTGGTGGAGCTTTGGCAGCAAGCATTAG 1026 0.3986 MVLYEHSDVFQWGLNLLEGDPAYNPGYYGNIIQHDTGDIYNGDYFHNHYDNECNQIENDEIIARTLQEEFSQLDIAEPTGYLQAGEEQFHVSETEHTYDNGWQNSSMMHYCSGGHDYVQEGTGDEEPSSSCSSPGETEEYSLEITDNYPLDDEVGRKLSQMIPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVEHRVQGDGNCQFRALSDQLYNAPDQHKFVRRQVVNQLKSNPEIYDAYVPMEYDDYLNKMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFEKPKGVIFLSFWAEVHYNSIYPQGDIASSESRKKKRWWSFGSKH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02385 341 Gene3D - 177 325 - -
Cca03g02385 341 PANTHER OTU DOMAIN CONTAINING PROTEIN 25 337 - -
Cca03g02385 341 SUPERFAMILY Cysteine proteinases 182 320 IPR038765 -
Cca03g02385 341 MobiDBLite consensus disorder prediction 117 139 - -
Cca03g02385 341 Pfam OTU-like cysteine protease 202 288 IPR003323 -
Cca03g02385 341 MobiDBLite consensus disorder prediction 123 139 - -
Cca03g02385 341 ProSiteProfiles OTU domain profile. 196 320 IPR003323 -
Cca03g02385 341 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 25 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02385 Cca-Chr3 44909529 44915164 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02385 - - gmx:100814098 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02385 03 44909529 44915164 Cca02g00439 02 9247901 9254498 PCT