Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02373 ATGGCATCTAGGAAGAGCTTCCTTTCGAAAGTGAGTTCCATCTTTGCATCATCAAGCACCGATTTGGAGCCGAAATTCTCAGAGGGTGACTTGGAATTGGATGAAGCTGAAGTCTTGTGGAACTTGTCCAACAGCAACAACAACACAGGGATAGAGGCCAAGAAGGGGTTACGATCTGGTAAGAAGAAAGGTAAAAAATTGGAGGGTGGTGGTGGGAGAGTGAACCCTTTGGGGTCCTCATCATTGCCAGTGAATATTCCTGATTGGTCCAAGATTTTGAAGGAGGATTATAACAAGAAGAAAGAAAGTGATGAAAGGGTTGTTAGTGATGATGATGATGAGAACAACGATCGAGTACCTCCTCATGAGTATCTTGCTAGGACAAGAGGGGCTTCTCACTCTGTGCATGAAGGGAGAGGAAGGACCCTCAAAGGTAGGGACTTGCGCAGTGTCAGAAATGCAATTTGGAAGAAAATGGGGATTGAAGATTAA 492 0.4472 MASRKSFLSKVSSIFASSSTDLEPKFSEGDLELDEAEVLWNLSNSNNNTGIEAKKGLRSGKKKGKKLEGGGGRVNPLGSSSLPVNIPDWSKILKEDYNKKKESDERVVSDDDDENNDRVPPHEYLARTRGASHSVHEGRGRTLKGRDLRSVRNAIWKKMGIED 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02373 163 Pfam Senescence regulator 66 162 IPR007608 -
Cca03g02373 163 PANTHER ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MOK16 1 163 - -
Cca03g02373 163 MobiDBLite consensus disorder prediction 45 145 - -
Cca03g02373 163 PANTHER EMB|CAB72159.1 1 163 - -
Cca03g02373 163 MobiDBLite consensus disorder prediction 92 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02373 Cca-Chr3 44717868 44719397 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02373 - - gmx:100786301 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02373 03 44717868 44719397 Cca03g02373 03 44717868 44719397 ECH
Cca03g02373 03 44717868 44719397 Cca02g00834 02 23233187 23234398 PCT