Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00834 ATGGCGTCAAGGAAGAACTTTCTTTCAAAGCCGAGTCGCTACATCTTTCCGGCAACCTCAGACACCCATTTGAGCCCAACCCAACAAGAGGGCATCTTCGAGTTCGACGAGGCTGAGTTGTGGAACCACTCCGAAGCCACCAAAAAGGGGTTACCTTCTTCGGGTTCGCGATCCCTTGCGAAGAGAGCATCGAGGAATAACAACAAGGTAGATCATGGTGGAGGAGGTCGAGTGGGTCCAGCGTCATTGCCCGTTAACATACCCGATTGGTCCAAGATCTTGAAGGAGGACTACAAGGAGCACCCAAAGTGGGAGAGTGATGGTGATGATGAAGAAGAACACGTTGGTGATGAAGGAAACCAACGAGGGTTTAGGGTACCCCCTCATGAGTATCTCGCTAGGACAAGAGGTGCTTCTCTCTCGGTGCATGAAGGGATTGGAAGGACCCTCAAAGGAAGGGACTTGCGTAGTGTCAGAAATGCCATTTGGAAGAAAGTGGGCTTTGAAGATTGA 513 0.5068 MASRKNFLSKPSRYIFPATSDTHLSPTQQEGIFEFDEAELWNHSEATKKGLPSSGSRSLAKRASRNNNKVDHGGGGRVGPASLPVNIPDWSKILKEDYKEHPKWESDGDDEEEHVGDEGNQRGFRVPPHEYLARTRGASLSVHEGIGRTLKGRDLRSVRNAIWKKVGFED 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00834 170 MobiDBLite consensus disorder prediction 98 124 - -
Cca02g00834 170 MobiDBLite consensus disorder prediction 47 63 - -
Cca02g00834 170 MobiDBLite consensus disorder prediction 98 128 - -
Cca02g00834 170 MobiDBLite consensus disorder prediction 44 84 - -
Cca02g00834 170 Pfam Senescence regulator 51 170 IPR007608 -
Cca02g00834 170 PANTHER ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MOK16 1 170 - -
Cca02g00834 170 PANTHER EMB|CAB72159.1 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00834 Cca-Chr2 23233187 23234398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00834 - - gmx:100790091 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00834 02 23233187 23234398 Cca02g00834 02 23233187 23234398 ECH
Cca03g02373 03 44717868 44719397 Cca02g00834 02 23233187 23234398 PCT