Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02368 ATGGACGCCAAACTCTTCAAATTAAACAGACTCACCGCCGCCATAGCTAGGCGCCTCGCCATACGCTCAATTCTACTGGCGTCGGCCATATCCATCGTCTCTCTCTTCCACGCGCAATCCATATTCAATGTGGGATCCCTCGCTCCCATCGCCACCTACTTCGATTGCGTCACATTCCGCCCCGCGTCCCGCTTCTGGCTCCCCTCCAATTGCCACAAAGACGCCAACTTGACGCTCGCCGTCGTCACCGACTTAATGGGTAACCGGTTGCTTCACCCCGGAGCCAACACCCTCTGCGTTGGACAAGCCTCCTCAATCGCAGTCACGGCAATCAAGCAGTTAGGCTTCTCCACCGTCAGCGCCGACCAAACGCACCGTTTCGGCCACAACACCTTCGATTTCGTCTTCTCCAGGGACCTCGACAAGGTCCCAGTCCCTGCCTCGCACGTGCTCGAGGTGGAGCGTGTGCTCAAGCCTGCTGGGGTTGGTGCGTTTCTTGTGTCCTCCATTGGCTCTCACCCCAACGATTTGATAAGAGCAGCCACCCCTGTGTCCTCTTTGTTGAGGTCTTCCGATGTCGTGCATGTTGGTTCCGTCAATCAGCTTAACCTTGTGGTTTTCAAGAAAAGATTTCAAAACGCCACGTCGTTTTATCAGCATCCTTTACCCGCGGATTGTCCCAGTCTCACCTTCACCAAGCCCCTCATAGAGTTGATGGAGCCTCTTGTGAGTGGGAAGGAGAAAGAGAAAGCACCTCCTGAGAGTGTTCCCTATTTGCCCAAGTTTGTGGATGTCTCCACTAGGAAGAGGCTGGTGTATATTGACATTGGTGTGGGGGAGCTGCTGAATGCCAATGCTAGTGATTGGTTTCTGCCATCGTATCCCATTGATCAGAAGGATTTCAATGTGTATTTTGTTCACTACAACACTTCGATTATGTTGTCCTATGTGAAGCGTCCTGGTGTTACCTTTGTTTATCACCCTGGTTTGGCTGGGAAAGTTACTCCCAAGCCAGATGACGATGGCGTGGATCCCTTTGTAGGGGAGGAGGAGTTTGATTTCCTAGCGTGGTTCAAGGAAACTGTGCAGTATGCTGATTTTGTGATCCTCAAGATGAATGCAGGGGATGTTGAACTAAAGTTTCTCTGGGATATATTTGAGAATGGAGCTATATGCTTTGTGGATGAGATGTTTCTGAGGTGTCCGGAGAGCAGCAAGGAAGGCTGCATGGATATTTACAAGGGTCTCCGAAGCAATGGTGTCTATGTCCATCAATGGTGGGGAGACTAA 1290 0.5116 MDAKLFKLNRLTAAIARRLAIRSILLASAISIVSLFHAQSIFNVGSLAPIATYFDCVTFRPASRFWLPSNCHKDANLTLAVVTDLMGNRLLHPGANTLCVGQASSIAVTAIKQLGFSTVSADQTHRFGHNTFDFVFSRDLDKVPVPASHVLEVERVLKPAGVGAFLVSSIGSHPNDLIRAATPVSSLLRSSDVVHVGSVNQLNLVVFKKRFQNATSFYQHPLPADCPSLTFTKPLIELMEPLVSGKEKEKAPPESVPYLPKFVDVSTRKRLVYIDIGVGELLNANASDWFLPSYPIDQKDFNVYFVHYNTSIMLSYVKRPGVTFVYHPGLAGKVTPKPDDDGVDPFVGEEEFDFLAWFKETVQYADFVILKMNAGDVELKFLWDIFENGAICFVDEMFLRCPESSKEGCMDIYKGLRSNGVYVHQWWGD 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02368 429 PANTHER PEPTIDE UPSTREAM PROTEIN 1 429 - -
Cca03g02368 429 PANTHER UPSTREAM ORF PROTEIN, PUTATIVE-RELATED 1 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02368 Cca-Chr3 44666419 44668271 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02368 - - ccaj:109796794 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02368 03 44666419 44668271 Cca02g00840 02 23443993 23445973 PCT