Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00840 ATGGATTCCAAGGCCTCCAAATTCCACGCGCTCAGCGGCTCCCTCGCTCGGCGCGTGTTCTTCCGCGCAATATTCCTGGCCTCCGCCGTTTCCCTCGTTTCCCTGCTCCGCTTCCTCCCCACCGTTGATTTCGAATCTCTGGCTCCCAAGACCTACGTTGACTGCATCAACGACTCAGATTCTCTCTCCCAAAACGCCACTTTGACCGCCGGTTCCTACTTGTTCCAGAGCCGCATCCTCAACACCTTCTGGGGCTCCTTCGACTCCATGAACTGCAGAAACGACACCGGTTTAGCTTCCGCCGTCATCGCCGCCTTGATGGGTAAACGACTCTTGGACGGCGCCGCCAACTCTCTCTGCGTCGGAGAAGCCTCACCCACCATTGTCTCCGCAATGCAACGCTTGGGATTCTCACGTGTCGTTGGCCTCCACAAGCACCCCTTTTTCTCCCTCAACAATAAGAACATCGCCTGCAAGTTTGACTACAAAGCCTCTTCCTTTGACTTCGTGTTCTCCATGGATGTCGACAAGGTTTCTGTCCCTGCGTTGCTTGTGCTCGAAGTTGAGCGCATCCTTAAGCCTAGTGGAATCGGGGCCTTGCTTGTGGGTTCCAATTCATCCTCCGTGTCTTCGTTTTTAAGATCTTCTAGTGTGGTGCATGTTGGTTATGTCAGCGAGCTTAAGCTCGTGGTTTTCAAGAAAATGTCCTTTTTTTATAACCATTTTCTTCCCGAAGATTGTGCTACTGCTAAGGTTGCATTCACCAAGCCGTTGGTGGAGATGATGGAGCCTCTGGTGGAGGACAGAGATAGACAAGATGGAAAGTATGAGAAAAGTGTCTCTTATTTGCCTACGTTTGTGGACGTTTCTAGGAGGAAGAGGTTGGTGTATATTGATATTGGGGTGAGTGGGTTGGTGAATGCAAATGTGACTGATTGGTTCCCACCCTCTTATCCCATTGATCTTAAAGCTTTCAGTGTGTTTTTTGTTCACTACGATGCTTCTCTGTTGTTGTCCCATGTGAAACGACCGCGTGTTACTTTTGTGTATCATCCGGGGTTGGCTGGGAATGTTGCAGCAAAGAGTGGTGTGGATGGAGATGTGGATTCGTTTTTGGGAGAGGAGGAGTTTAATTTCCTTGTGTGGTTCAAGGAAACTGTGCAGTATGCGGATTTTGTGGTTCTCAAGATGAATGCAGGGGAAGTTGAAATGAAGTTCCTGGTGGATATATTTGAGAGTGGAGCAATATGCTCTGTTGATGAGTTGTTTCTTAGCTGCTCAGAGAGTGGTGAAAGTGAAACTATGAGCAGTAGAAGAAGGGAAAGCTGCATGGATATTTACAAGGGTCTCAGAAGCAATGGTGTTTATGTTCATCAATGGTGGGATGCCAAATTGCATCAAGGGTCTCAAGTGTCATATGTACAGTGA 1428 0.4853 MDSKASKFHALSGSLARRVFFRAIFLASAVSLVSLLRFLPTVDFESLAPKTYVDCINDSDSLSQNATLTAGSYLFQSRILNTFWGSFDSMNCRNDTGLASAVIAALMGKRLLDGAANSLCVGEASPTIVSAMQRLGFSRVVGLHKHPFFSLNNKNIACKFDYKASSFDFVFSMDVDKVSVPALLVLEVERILKPSGIGALLVGSNSSSVSSFLRSSSVVHVGYVSELKLVVFKKMSFFYNHFLPEDCATAKVAFTKPLVEMMEPLVEDRDRQDGKYEKSVSYLPTFVDVSRRKRLVYIDIGVSGLVNANVTDWFPPSYPIDLKAFSVFFVHYDASLLLSHVKRPRVTFVYHPGLAGNVAAKSGVDGDVDSFLGEEEFNFLVWFKETVQYADFVVLKMNAGEVEMKFLVDIFESGAICSVDELFLSCSESGESETMSSRRRESCMDIYKGLRSNGVYVHQWWDAKLHQGSQVSYVQ 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00840 475 PANTHER PEPTIDE UPSTREAM PROTEIN 1 462 - -
Cca02g00840 475 PANTHER PEPTIDE UPSTREAM PROTEIN 1 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00840 Cca-Chr2 23443993 23445973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00840 - - gmx:100782226 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02368 03 44666419 44668271 Cca02g00840 02 23443993 23445973 PCT