Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02352 ATGAAGCTCTCGGGCAAAGCCATTTCGAGTCCGGGTCGGAGCGACAAGTTCCCTCCCCCATTGATGCGGTTCCTGAGGAGCAATGCAGGAAGCAGGAGCAGAAGGTCCAGGTCCAGCCCCATGTTCGTCCGCAAGAAAAACGCCACCACCATCGAAACCCAGGAGCCCTCCTCCCCCAAGGTCACCTGCATGGGCCAAGTCCGAGTCAGACGCTCCTCCAAACAGCCCCCAACCAAGCGCGACACGCCCCGCAACTGCTGCTCCATCCGAAAGCCCAACTCCTGCCGCTGCCGGCCCCTCTGCCTCTGGCCCTTCTTCCGCCGAaagcccaagcccaagcccaagcccaaCTACCATCCCCATCCCCAAGCCCAAGAATCAGAATCAGAATCTGCCTTCCGAGAGACGCTGAATCTCAATGTGGATAACGCTTTCGCTTCCACTTCCAACTCCTCCACGCCTCCCAAAAACGCTTTGCTTTTAACTCGCTGCAGATCCGCACCCTACAGATCTTCCTCTTTGGCGAGTAGGTTTTGGGGTTCCCCCGTCAACACGGAACTGCCAAGTACAGATTCCACTTCCCAGGAACCGCAAAAGCTGGATTCCCTCACCCAACCACTCAAGCTTCAACAATTATCCAATGGAAAGGAACCCCAACCTCAAAACCAAACACTCTCTCCATCGCGACCTACTCTTCTCACTAGGTGCAAATCGGAACCCGCCAGAACCGGACACAGGCTTGACTCGCTCTGGAAAAAAACAAGAAAAATCAGAAGGGATGTGGGAGGGAATTGTGAACCTAGGATTCAGCGGGTACATATATTGTTACAAACTCAAATGCATTTGCAGCGGTTGTTGTTATCTGGTTGA 870 0.5253 MKLSGKAISSPGRSDKFPPPLMRFLRSNAGSRSRRSRSSPMFVRKKNATTIETQEPSSPKVTCMGQVRVRRSSKQPPTKRDTPRNCCSIRKPNSCRCRPLCLWPFFRRKPKPKPKPNYHPHPQAQESESESAFRETLNLNVDNAFASTSNSSTPPKNALLLTRCRSAPYRSSSLASRFWGSPVNTELPSTDSTSQEPQKLDSLTQPLKLQQLSNGKEPQPQNQTLSPSRPTLLTRCKSEPARTGHRLDSLWKKTRKIRRDVGGNCEPRIQRVHILLQTQMHLQRLLLSG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02352 289 MobiDBLite consensus disorder prediction 1 84 - -
Cca03g02352 289 MobiDBLite consensus disorder prediction 212 231 - -
Cca03g02352 289 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 1 256 - -
Cca03g02352 289 PANTHER PROTAMINE P1 FAMILY PROTEIN 1 256 - -
Cca03g02352 289 MobiDBLite consensus disorder prediction 112 133 - -
Cca03g02352 289 MobiDBLite consensus disorder prediction 180 200 - -
Cca03g02352 289 MobiDBLite consensus disorder prediction 29 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02352 Cca-Chr3 44502239 44504672 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02352 - - ccaj:109796742 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02352 03 44502239 44504672 Cca03g02352 03 44502239 44504672 ECH
Cca03g02352 03 44502239 44504672 Cca02g00852 02 23737559 23738188 PCT