Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00852 ATGAAGGTAGCGACGAAAGGCATTTGTAGTCCGGGTCGAAGCGACAAGTTCCCACCACCGTTGATGAGATTCCTcagaaacaatgcgggaagcagaagcagaagcagaGGGAGGTCGAGATCCAGCCACACCATGTTTTTCAGAAAGAAGAACAGCGCCATGGAAACCACGCAAGAGCCCTCTTCCCCCAAAGTCACCTGCATGGGGCAAGTCAGAGTCAAATGctccaactccaactccaactccaactccaacGGACCTCAGGCTCAGACCAACTGCTGCTGTGTCCCACATCGTTTAGTTTCTCTTTTCCGCGGCCTCTGCCAACCGCTTATAAAGACAAAGAAAAGGGACTCCAAAGTCACCCAAGCTTGTTCCCCCAAAACAGAGTTCAATTTCAGGGGAAGGCCTAGACCCAGGCCTAACGCAGTCGTTTCGATTGCTCCTCCCAGAAACGCTTTCTTATTGACGCGCTGCAGATCCGCGCCGGGGAGAAGGGACACGGACCTTCGAAAGTTCCCATTCTTCAGAGACCTTGAGCTGCGTCCTCTCGTGCTCACCAGGTGCAAATCCGAACCCGCCAGAACCGCGCACAACAAACTCAAATTCAACACAACTTTCGGTTTGTGA 630 0.473 MKVATKGICSPGRSDKFPPPLMRFLRNNAGSRSRSRGRSRSSHTMFFRKKNSAMETTQEPSSPKVTCMGQVRVKCSNSNSNSNSNGPQAQTNCCCVPHRLVSLFRGLCQPLIKTKKRDSKVTQACSPKTEFNFRGRPRPRPNAVVSIAPPRNAFLLTRCRSAPGRRDTDLRKFPFFRDLELRPLVLTRCKSEPARTAHNKLKFNTTFGL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00852 209 MobiDBLite consensus disorder prediction 1 64 - -
Cca02g00852 209 MobiDBLite consensus disorder prediction 46 64 - -
Cca02g00852 209 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 181 204 - -
Cca02g00852 209 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 140 165 - -
Cca02g00852 209 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 1 116 - -
Cca02g00852 209 PANTHER PROTAMINE P1 FAMILY PROTEIN 1 116 - -
Cca02g00852 209 PANTHER PROTAMINE P1 FAMILY PROTEIN 181 204 - -
Cca02g00852 209 PANTHER PROTAMINE P1 FAMILY PROTEIN 140 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00852 Cca-Chr2 23737559 23738188 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00852 - - gmx:102666606 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02352 03 44502239 44504672 Cca02g00852 02 23737559 23738188 PCT