Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02319 ATGGCGGCGACCATAGCTCTCCTGGCCCTGGTCCTGGTGCTCATCGTGTCCCCCTCGGCGGCGGAGATAAAGTCCCTGAGCATAAAGTCGGACAAGCGGGCCATGATCCTGTTGGAGAAATTCGGGTTCACGCACAAGGGGCACGTGTCGATCGCCGTGTCGTGGGTGTCGGTGGGAGTGCTGTCCTCCGGCGTGCAGGCGGAGTCCTCGCGGCTGGGGTTCTTCCTCCTGAACGAGGAATCGCTCCTCCAAGTCCTGATGGAGATCCAGCAGAACCCCTCCTTCTGCGTTCTGGACTCCCACTACATCTTCCTCCTCTTCACCTTCCGCGAACTCTCCCCTCCCCCATTGGCCTCCTTCAACCGCTCCTACCCGGTCACCTCCCCCAACGAATACAGCCTCTTCTTCGCCAACTGCGCACCGGAAACGTCGGTCTCCATGGTCGTCCACACCGAGGCCTACAATCTCCACGCCGACAACTCCCGCGACTTCCTCTCCGCCGGCCAGACCCACCTCCCCTCTCTCTTCTCCCTCTTCTCCGTCGCCTACCTCGCCTTCTTCGCCTTCTGGCTCTACATTTGCTACACCAACAACCGCTCCGTCCACCGCATCCACTTCCTCATGGCTCTCCTCCTCCTCATGAAGGCCCTCAACCTTATCTGCGCCGCCGAGGATAAGCACTACGTCAAAGTCACCGGCCTCCCCCACGGCTGGGACGTTCTCTTCTACATCTTTCAGTTCATCCGCGTCGTTTTGCTCTTCACCGTCATCGTTTTGATCGGGACTGGATGGTCTTTTCTCAAACCCTTCCTCCAAGACCGGGAGAAGAAGGTCTTGATGATCGTCATTCCCCTTCAGGTTCTCGCCAACTTGGCCTCCGTCGTCATCGGCGAGACCGGCCCTTTCATCAAAGATTGGGTTACTTGGAATCAGGTTTTCTTGCTTGTCGATATCATCTGTTGTTGTGCCATCATTTTCCCCATTGTCTGGTCCATTAGGTCCTTGAGAGAGACCTCCAAAACCGACGGCAAAGCTTCTAGGAACCTCGCAAAATTGACGCTTTTCCGCCAGTTTTATATCGTTGTTATTGGGTATCTCTATTTCACCAGGATCGTGGTCTTTGCGTTGAGGACCATTGCTGCTTATAAGTACCAGTGGGTGAGTAATGCTGCCGAGGAGACTGCCAGTCTTGCTTTTTATGTTGTCATGTTCTATATGTTTAGACCTGTGGAGAAGAATGAGTACTTTGTGCTTgacgaggaggaggaggaggCTGCGGAAATCGCTCTCAAGGATGAGGAGTTTGAGCTTTGA 1314 0.5403 MAATIALLALVLVLIVSPSAAEIKSLSIKSDKRAMILLEKFGFTHKGHVSIAVSWVSVGVLSSGVQAESSRLGFFLLNEESLLQVLMEIQQNPSFCVLDSHYIFLLFTFRELSPPPLASFNRSYPVTSPNEYSLFFANCAPETSVSMVVHTEAYNLHADNSRDFLSAGQTHLPSLFSLFSVAYLAFFAFWLYICYTNNRSVHRIHFLMALLLLMKALNLICAAEDKHYVKVTGLPHGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQDREKKVLMIVIPLQVLANLASVVIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKASRNLAKLTLFRQFYIVVIGYLYFTRIVVFALRTIAAYKYQWVSNAAEETASLAFYVVMFYMFRPVEKNEYFVLDEEEEEAAEIALKDEEFEL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02319 437 Pfam Lung seven transmembrane receptor 132 413 IPR009637 GO:0016021
Cca03g02319 437 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR FAMILY PROTEIN 3 436 - -
Cca03g02319 437 Coils Coil 418 437 - -
Cca03g02319 437 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 3 436 IPR009637 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02319 Cca-Chr3 44153299 44155324 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02319 K22985 - gmx:100811083 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02319 03 44153299 44155324 Cca03g02319 03 44153299 44155324 ECH
Cca03g02319 03 44153299 44155324 Cca02g00898 02 24527718 24531015 PCT