Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00898 ATGCCAATTTCCCCCCACCGCTCCACAATGGGCAAAACCCCcatcctcatcctcatcctcatcctcatcctcCTGCTGATTTCCCCCTCCACCGCCGAGATCAAAACCCTAACGATCACCTCCGACAACCGGCCCATGATCCTGCTTGAGAAATTCGGGTTCACGCACACGGGGCACGTGTCGATCTCCGTGTCGTCGGTGTCCGTGGTGGCCGGCACAGGGTCCCAACCAGATCCCTCCCGTCTGGGATTCTTCCTCCTGAGCGAGGAGTCCCTGCTCCAAGTCCTGATCGAGATGCAGCAAAACCCTAACTTCTGCGTCCTTGACTCCCACTACACCAACCACCTCTTCACCTTCCGCGACCTCTCCCCTCCTCCCGCGGCCTCCGCCAACAACACCTACCCCGTCACGCTCCCCAACGAGTACAGCCTCTTCTTCGCCAACTGCGCCCCGGAAACCACCGTCTCCATGTCCCTCCGCACCGAGCTCTTCAACCTCAACCCCTCCGACTCCTCCCGCGACTACCTCTCCGCCGGCCAGACCAACCTCCCCACCCTCTTCTTCCTCTTCTCCCTCCTCTACTTGGCCTTCCTCGCCCTCTGGCTCCGCCTCTGCCTCCTCAACCGCCGCTCCCTCCACCGCATCCACCTCCTCATGGCCGCCCTCCTCCTCATGAAGGCCCTCAACCTCCTCTGCGCCGCCGAGGACAAACACCTCATCAAAACCACCGGCACCCCCCACGGCTGGGAcgtcctcttctacatcttccagttcatccgcgtcgtcctcctcttcaccgtcatcgtcctcgtcgGCACCGGCTGGTCCTTCCTCAAACCCTTCCTCCAAGACCGCGAGAAGAAGGTCCTCATGATCGTCATCCCCTTGCAAGTCCTCGCCAACGTCGCCTCCGTCGTCATCGGCGAAACCGGCCCCTTCATCAAGGACTGGGTCACCTGGAACCAGGTCTTCCTCCTCGTCGACATCATCTGCTGCTGCGCCATCATTTTCCCCATCGTCTGGTCCATTAGATCGCTCAGGGAAACCTCCAAAACCGACGGCAAAGCCGCCAGAAACTTGGCCAAGTTAACCCTCTTTAGGCAATTCTACATTGTTGTCATTGGCTACTTGTACTTCACACGCATTGTTGTCTTTGCGTTGAAGACCATTGCTGCTTATAAGTACCAGTGGGTGAGTAATTTCGCCGAGGAGGCGGCTAGTCTCGCGTTCTACATTGTCATGTTCTATATGTTTAGGCCGGTCGAGAGGAATGAGTACTTTGCGCTCGATGACGAGGAAGAAGAGGCGGCAGAGATTGCGCTCAGGGATGAAGAATTTGAGCTTTGA 1347 0.5412 MPISPHRSTMGKTPILILILILILLLISPSTAEIKTLTITSDNRPMILLEKFGFTHTGHVSISVSSVSVVAGTGSQPDPSRLGFFLLSEESLLQVLIEMQQNPNFCVLDSHYTNHLFTFRDLSPPPAASANNTYPVTLPNEYSLFFANCAPETTVSMSLRTELFNLNPSDSSRDYLSAGQTNLPTLFFLFSLLYLAFLALWLRLCLLNRRSLHRIHLLMAALLLMKALNLLCAAEDKHLIKTTGTPHGWDVLFYIFQFIRVVLLFTVIVLVGTGWSFLKPFLQDREKKVLMIVIPLQVLANVASVVIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTRIVVFALKTIAAYKYQWVSNFAEEAASLAFYIVMFYMFRPVERNEYFALDDEEEEAAEIALRDEEFEL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00898 448 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR FAMILY PROTEIN 14 447 - -
Cca02g00898 448 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 14 447 IPR009637 GO:0016021
Cca02g00898 448 Pfam Lung seven transmembrane receptor 142 424 IPR009637 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00898 Cca-Chr2 24527718 24531015 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00898 K22985 - gmx:100815429 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02319 03 44153299 44155324 Cca02g00898 02 24527718 24531015 PCT