Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02301 ATGAGGACAGAGTCGAAGAAGATATCAAAGTCTTCGTGGCCCAAATTAGCCGTCAGGAAGTGGCTCAATATGAAAAGCAGTGCCGAGAAGTTTCACTCAGATTACGAAGCAACAGCAACTGCGAATGAGAGGAGAAAGAGCTGTTCAGACCAGGATCGTTACGCCGTCGTTCCGGAAGATTTCTCAGAGGGGTGGGTGATGGATGCTACAAGTGGAATGAAACGTTCGGTACTTGGGAAGAAATCAAGTCCTGACACTGGGGCGATGGACCTTAGGATGTTCGTGGGGACGTGGAATGTCGGAGGGAAGTCACCGAACGAAGCCTTGAATTTGAGGAATTGGCTGACGTGTCCTTCCCCAGCTGACATATATGTTATTGGGTTCCAAGAAATCGTACCGCTAAACGCGGGGAACGTGCTTGGGCCTGAGGACAGTGGCCCAGCAGCGAAGTGGCTGGGCATTATCCGTCAAGCCTTGAACAGCAACAAGAGCGAGCGTGAAATGTCACAGTACTACGACAGCGATCCAGAAGGAAGCCCGAAGTGTAGGCCCAGTTTCTCGGAGATGCTCTCATTAGAGGAAGAGTTTGGAAATGGAGAAAGCTCTCCTAGGAGTGCGCAACGCTATTGCCTAGCAGCAAGCAAACAGATGGTTGGTATATTCTTATCCGTGTGGGTAAAAGAGGATCTTTGCAACCATGTTAGCAATTTGAAAGTGTCCTGCGTTGGCAGAGGCATCATGGGTTATCTTGGAAACAAGGGTTCAACGTCAATCAGCATGACATTGTACAACACCACGTTCTGCTTCGTTTGCACCCACTTGGCTTCTGGGGAGAAATTTGGTGACGAGTTGCGAAGAAACTTTGACGTATCGGAAATCTTGAAGAAAACTAAATTTTCTCACTCCTTTAAATCTCAGCTTGCTCCCGAGACCATACTGGAACACGATAATGTTATTTGGCTTGGCGATTTGAATTACCGGCTAGCTGCTGGCTACGATGACACACATGAACTGCTAAAGAAGAATAATTGGCAAGCATTACTAGAGAAGGATCAGCTAAGGATAGAGCAGAGAGCTGGTCGAGTATTTAAAGGTTGGAATGAAGGGAACATATACTTTGCTCCTACTTACAAATACTTGACCAATTCTGATCACTATGTTGCCCAATCCTCCAAGGAAAAACGACGGACTCCTGCTTGGTGCGATCGAATTCTCTGGAAGGGGGAAGGCCTGAATCAGATGTGGTATGTTCGAGGAGAGTCCAAATTCTCAGACCACAGGCCTGTGTACTCACTATTCTCGGTTCAAGTGAACTTGAGAAGCAAGAACATAGCACCATCCACTGGCACTATGCCAAAGTCCTGTCCCTTAAAACCGTTGACAAATGTTGCGTTGTCATCGACTTGTTCTGCTGCTAAAGTCCAGGCAGAAGAGCAACTCTTGTTGCTAACGAGAGCACAAAGTTGCATAGACACTGTACCCAGGTTTGTTTGA 1494 0.4719 MRTESKKISKSSWPKLAVRKWLNMKSSAEKFHSDYEATATANERRKSCSDQDRYAVVPEDFSEGWVMDATSGMKRSVLGKKSSPDTGAMDLRMFVGTWNVGGKSPNEALNLRNWLTCPSPADIYVIGFQEIVPLNAGNVLGPEDSGPAAKWLGIIRQALNSNKSEREMSQYYDSDPEGSPKCRPSFSEMLSLEEEFGNGESSPRSAQRYCLAASKQMVGIFLSVWVKEDLCNHVSNLKVSCVGRGIMGYLGNKGSTSISMTLYNTTFCFVCTHLASGEKFGDELRRNFDVSEILKKTKFSHSFKSQLAPETILEHDNVIWLGDLNYRLAAGYDDTHELLKKNNWQALLEKDQLRIEQRAGRVFKGWNEGNIYFAPTYKYLTNSDHYVAQSSKEKRRTPAWCDRILWKGEGLNQMWYVRGESKFSDHRPVYSLFSVQVNLRSKNIAPSTGTMPKSCPLKPLTNVALSSTCSAAKVQAEEQLLLLTRAQSCIDTVPRFV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02301 497 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 9 484 IPR045849 GO:0004445|GO:0046855
Cca03g02301 497 SUPERFAMILY DNase I-like 75 438 IPR036691 -
Cca03g02301 497 Pfam Endonuclease/Exonuclease/phosphatase family 96 426 IPR005135 GO:0003824
Cca03g02301 497 SMART i5p_5 89 441 IPR000300 GO:0016791|GO:0046856
Cca03g02301 497 Gene3D Endonuclease/exonuclease/phosphatase 69 451 IPR036691 -
Cca03g02301 497 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 9 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02301 Cca-Chr3 43944937 43949977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02301 72 437 Acyl Lipid Metabolism Gene Families AT2G43900 27.512 5.31e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02301 - - gmx:100800223 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02301 03 43944937 43949977 Cca02g00917 02 24963496 24969582 PCT