Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02266 ATGGCTAACTCAAACCTTAGAATCACCATTGAAAGAAACCCTTCTCAGTCACGCCTAGCTGAGTTGAACATCAAGTGCTGGCCCAAGTGGGGTTGTTCTCCAGGGAAGTACCAATTGAAGTTTGATGCAGAAGAGACATGCTACTTGTTGAAAGGGAAGGTGAAGGCATACCCAAAAGGTTCATCAGAGTTTGTGGAGTTTGGAGCTGGAGATCTTGTGACAATTCCTAGAGGAATGAGTTGCACTTGGGATGTGTCTGTTGCAGTTGATAAGTACTACAAGTTTGAATCAAATTCTTCTTCATCATCATCATCGTGA 318 0.4308 MANSNLRITIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEFGAGDLVTIPRGMSCTWDVSVAVDKYYKFESNSSSSSSS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02266 105 SUPERFAMILY RmlC-like cupins 17 93 IPR011051 -
Cca03g02266 105 PANTHER OS04G0445200 PROTEIN 1 102 - -
Cca03g02266 105 Gene3D Jelly Rolls 1 95 IPR014710 -
Cca03g02266 105 Pfam EutQ-like cupin domain 20 93 IPR008579 -
Cca03g02266 105 CDD cupin_TM1112-like 27 95 - -
Cca03g02266 105 PANTHER RMLC-LIKE CUPINS SUPERFAMILY PROTEIN 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02266 Cca-Chr3 43538603 43539339 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02266 - - gmx:100793722 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02266 03 43538603 43539339 Cca03g02266 03 43538603 43539339 ECH
Cca03g02266 03 43538603 43539339 Cca02g00959 02 25741014 25741922 PCT