Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02239 ATGGGTTGTTTTCTTCATTGTTTAGGTTCCCCAAAACCCAGGCGCAAGACACACCATCACCATCGAAATGCCAGAGACAGGTTAGAGCAACCTTCCGTTCAGGATTGCTCCAAAACGGTGCTACTTACCACTGAATCGCAAGTCCAGGCTAAACCTGAGGGGAAATTAAACGCCAGCCCCAGAAAGAAGGTAACTTTTGATGTCAATGTGAAAACGTATGAGCCTGAACAGGTTTATGATTTCCAACCAGAGAAGAGTGAAGAGGAAAGAACTTTGGTTGAGAAATTAAGCCAATCAAGGTCTTACTCTGAAGAAAGTTCAGTGACTTCAGTGGAGTCTTATCCAACAAACCATAGGTACCACAATTGCTCTTGTACTGGTGAAGATGAAGAAGATGGAGCGATGGAATATTGGGACAGTGATCTCACTGCTGAAGATGAGGATGATGGTGATAGTGACATGGGAGAAGAGTATGAAGAAGTTGGAGAGGACTTTGAAGATGGAATAGTGTACTTAAGGTCGAGAAATGGTGCTAATAATCAAGGGGTTGTTGAGGAGCTGGAAAGTCCAATTCATGTGTATGATAAGGATGTGAAATCAATGGGGTTGAACCGCAATGTTCGAGATAGGAGTGTGTATGTTCATCCTGTGCTGAACCCTGTGGAGAATCTCAGTCAATGGAAAGCAGTTAAGGCTAAAAGAACACCACCATTGGTGTCTCAGAAGGAGAATTTGGTTTTGAATCAAGCTGCATTTGGAGCAGAATCGCCAAAGAAGTTGAACAAGGAAATCGCAGTTGATGCTAGCCTTTCAAATTGGTTGGCTTCATCAGAAACTACACCGGTCAACAAGGGTTTGTATGATGTGGGTACCCCAGATAGGAGCAGCTCACAAGGCTCAAATTCAGTGATGAGTTATGAAGATAGGCCTATTATAGGCAGTGTTGGGAGCTACTGGAATTGCGGGGGCTATGCTGAGGATTCTGGCTCAGCAAATAGAGTAAATTCAAGAAGGGTACATTTGGAGTGA 1029 0.4373 MGCFLHCLGSPKPRRKTHHHHRNARDRLEQPSVQDCSKTVLLTTESQVQAKPEGKLNASPRKKVTFDVNVKTYEPEQVYDFQPEKSEEERTLVEKLSQSRSYSEESSVTSVESYPTNHRYHNCSCTGEDEEDGAMEYWDSDLTAEDEDDGDSDMGEEYEEVGEDFEDGIVYLRSRNGANNQGVVEELESPIHVYDKDVKSMGLNRNVRDRSVYVHPVLNPVENLSQWKAVKAKRTPPLVSQKENLVLNQAAFGAESPKKLNKEIAVDASLSNWLASSETTPVNKGLYDVGTPDRSSSQGSNSVMSYEDRPIIGSVGSYWNCGGYAEDSGSANRVNSRRVHLE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02239 342 MobiDBLite consensus disorder prediction 80 95 - -
Cca03g02239 342 MobiDBLite consensus disorder prediction 284 304 - -
Cca03g02239 342 MobiDBLite consensus disorder prediction 96 122 - -
Cca03g02239 342 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 333 IPR039300 GO:0007142
Cca03g02239 342 PANTHER RRNA BIOGENESIS PROTEIN RRP36 1 333 - -
Cca03g02239 342 MobiDBLite consensus disorder prediction 10 35 - -
Cca03g02239 342 MobiDBLite consensus disorder prediction 80 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02239 Cca-Chr3 43228857 43230507 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02239 - - gmx:100808067 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02239 03 43228857 43230507 Cca03g02239 03 43228857 43230507 ECH
Cca02g00984 02 26103783 26105738 Cca03g02239 03 43228857 43230507 ECH
Cca03g02239 03 43228857 43230507 Cca02g00984 02 26103783 26105738 PCT