Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02237 ATGGCAGTGATAGAAGAAAAAGGCCCTGCAAATGGGAACCAAGATTACACTCAAGATGGGACAGTGGACCTTAAAGGTAGACCCGTTTTGAGATCAAAAACGGGAAAATGGAAAGCATGTTCCTTCATAGTAGGGTATGAAGTGTTTGAGAGGATGGCTTTCTACGGGATACAATCAAACCTAGTGCTGTATCTAACAAGGAAGCTCCATGAGGGCACTGTGACAGCTTCAAACAACGTTAGCAACTGGGTTGGTGCAGTGTGGATGATGCCACTGGCAGGAGCTTTCATAGCTGATGCCTATCTTGGACGATATTGGACCTTTGTAATTTCATCAGGCATCTATGTTCTGGGAATGGCTCTGTTGACTCTAGCAGTTTCATTACAAGCCCTGAGACCTCCACCATGTGTTGATGATCACAATTGCCCGCATGCATCGTCACTGCAATATGGTATTTTCTTCTTAGGCCTTTACATCATTGCAGCAGGCACAGGGGGAACCAAACCCAACATTTCCACCATGGGAGCGGATCAATTTGATGATTTTGAGCCCAAAGAGAGATCACATAAGCTTTCCTTCTTCAATTGGTGGTTTTTTAGCATTTTCTTTGGTACCCTTTTCGCCAACACCTTTTTGATCTACATACAAGACTATGTGGGTTGGACCATTGGATATGGCCTTCCCACCCTTGGCCTTGCTTTTTCAGTATTGGTGTTTCTGGTAGGAACACCTTATTATAGGCACAAATTGCCCTCAGGTAGCCCTATAACAAGGATGCTTCAGGTCTTTGTTGCTGCTACAAGGAAGTGGAAGCTACATGTCTCAGATGATCCAAAAGAGCTACATGAGCTGAGCATTGAAGAGTATGCAAGTAATGGAAGAAACAGAATTGATAAGAGCTCTTCATTCAGTTTTCTTGACAAAGCTGCTGTAAAGACAGGTCAAACATCACCATGGATGCTTTGTACAGTGACTCAAGTAGAGGAAACCAAGCAAATGACAAAACTGATTCCCATCATGCTTACAACCATTGTTCCAAGCACCTTGATAGTTCAAACAAGCACACTCTTTGTCAAACAAGGTGCCACCCTAGACAGAAGCATGGGACCTCATTTTAAAATTCCCCCAGCATGCCTTACAGCATTTGTAACCCTCTCCATGCTCATAACCATTGTCATGTATGACCGTCTTTTTGTTCCCGCAATTCGGCGCTACACAAAGAACCCAAGAGGAATCACAATGCTGCAGAGACTTGGCATTGGACTCGTGCTACATGTCACCATAATGGTCACTGCATGTTTTGCTGAAAGAAAGAGACTGAGTGTTGCAAGAGAGAAGGACCTTTTAGAGCAGAAAGATGCAATTCCCCTAACTATTTTCATCCTCCTCCCTCAGTATGCTTTGGCAGGGGTTGCGGATAACTTTGTGGAAGTTGCCAAGATGGAGTTATTCTATGATCAAGCACCAGAAGGAATGAAAAGTCTTGGAACATCATATTTCACAACCACTTTAGGTATTGCAAGTTTTCTCAGCACTTTTCTTCTGTCAACTGTTGCGGATATCACCAAGAGAAATGGTCACAAGGGTTGGGTTTTGGATAATCTAAACGTCTCTCACTTGGATTATTATTATGCTTTCATGGCCATACTAAGCTTTCTCAACTTCCTCTGCTTTTTGGTTGCTGCCAAGTTCTTTGTGTATAATGTTGATGTAACACAAAACAGATTGGGTTTGGAGGTTAACCCCCCTTCGTCACAGCCACAGGACAAGACTGGAATAAGCCCAAGCACCCCACAAGCAGATGCCAAATCTTAG 1815 0.4347 MAVIEEKGPANGNQDYTQDGTVDLKGRPVLRSKTGKWKACSFIVGYEVFERMAFYGIQSNLVLYLTRKLHEGTVTASNNVSNWVGAVWMMPLAGAFIADAYLGRYWTFVISSGIYVLGMALLTLAVSLQALRPPPCVDDHNCPHASSLQYGIFFLGLYIIAAGTGGTKPNISTMGADQFDDFEPKERSHKLSFFNWWFFSIFFGTLFANTFLIYIQDYVGWTIGYGLPTLGLAFSVLVFLVGTPYYRHKLPSGSPITRMLQVFVAATRKWKLHVSDDPKELHELSIEEYASNGRNRIDKSSSFSFLDKAAVKTGQTSPWMLCTVTQVEETKQMTKLIPIMLTTIVPSTLIVQTSTLFVKQGATLDRSMGPHFKIPPACLTAFVTLSMLITIVMYDRLFVPAIRRYTKNPRGITMLQRLGIGLVLHVTIMVTACFAERKRLSVAREKDLLEQKDAIPLTIFILLPQYALAGVADNFVEVAKMELFYDQAPEGMKSLGTSYFTTTLGIASFLSTFLLSTVADITKRNGHKGWVLDNLNVSHLDYYYAFMAILSFLNFLCFLVAAKFFVYNVDVTQNRLGLEVNPPSSQPQDKTGISPSTPQADAKS 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02237 604 SUPERFAMILY MFS general substrate transporter 28 562 IPR036259 -
Cca03g02237 604 Pfam POT family 105 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca03g02237 604 PANTHER PROTEIN NRT1/ PTR FAMILY 5.2-LIKE 19 578 - -
Cca03g02237 604 Gene3D MFS general substrate transporter like domains 9 573 IPR036259 -
Cca03g02237 604 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 19 578 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca03g02237 604 CDD MFS_NPF5 37 567 IPR044739 GO:0042937|GO:0042938|GO:0071916
Cca03g02237 604 MobiDBLite consensus disorder prediction 579 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02237 Cca-Chr3 43209834 43212922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02237 4 574 Organic Solute Cotransporters AT5G46040 59.059 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02237 - - gmx:100807002 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02237 03 43209834 43212922 Cca03g02237 03 43209834 43212922 ECH
Cca03g02237 03 43209834 43212922 Cca02g00063 02 1036629 1045698 PCT