Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00063 ATGGAAGAGGGAAGAAGCTTGGTGAGTGGGTATGCACAAGATGGAACTGTGGATCTTAAAGGAAAACCTGTTCTCAAATCTAAACGAGGTGGTTGGAGAGCTTGTTCCTTTCTTCTTGTGTATGAGGTATTCGAAAGAATGACTTATTATGGAATATCATCAAACTTGGTCCTGTATCTGACAAAGAAGCTTCACCAAGGCACTGTCACTGCTTCAGACAATGTCAACAATTGGGTTGGCACTACTTATATAACTCCCATATTAGGTCCCTATGTTGCTGATGCTCACCTTGGCCGCTATTGGACCTTTGTCATTGCCTCTGTTATCTATCTATTGGGTATGTGTCTGCTTACCCTATCTGTTTCCCTTCCAAGCCTAAGGCCACCAGAGTGCCATGAAATGGATGTGACAAAATGCAAGAAGGCCACCACACTACAGTTATCTGTGTTCTATGGTGCACTCTACATCTTATCAGTGGGGGGTGGTGGAACCAAGCCCAACATTTCCACCATTGGTGCTGACCAATTTGATGATTTTGACCCCAAAGAGAAGGCACATAAGCTCTCATTCTTCAACTGGTGGTTTTCCAGCATCTTCATTGGGACCCTTTTTGCATTCACAGTTCTAGTGTATATACAAGACAATGTGGGCTGGGCTCTTGGCTATGGTATTCCAACTATTGGGCTTGCAATAGCACTTATTGCATTCCTGGCAGGCACACCCCTCTATAGACATAGGTTGGCCTCAGGGAGTTCATTTACTCGAATTGCCAAGGTTATAGCGGCTGCTTTGAGGAAAAGAAATGAAATTGTTCCTGTTAGTCCCACAGAACTACACGAGCTTGATGTTGAAGAGTACACAAAGAAAGGAAAATTCAGGATTAATTCCACTCCATCATTGAGCTTCCTCAACAAGGCCTGTGTCAAAACTAGTTCAAGTACTAGTAGTGAATGGATGCTATGCACAGTTACTCAAGTAGAGGAAACCAAGCAAATCCTCAGAATGATCCCCATCTGGGCTTCAACATTCATTCCTAGCACAATGCTTGCTCAGACAAATACCCTTTTTGTAAAGCAAGGAGTTACTCTTGACAGACACATTGGAAGATTCAACATTCCCCCAGCAAGTTTGATTGCATTTACATCTTTCACCATGCTAGTCTGTGTTGTACTCTATGACCGTGTCTTTGTCAAGATCATGAAGAGATTCACCAAGAACCCCAGAGGGATCACACTCCTTCAAAGAATGGGAACAGGAATCATGATCCACATAGTGACCATGATAGTGGCATCTTTGACTGAAAGACATAGACTTAAAGTGGCCAAAGAACATGGGGTGGTTGAAATTGGAGGACAAGTTCCTTTGAGCATACTCATTTTGGCTCCTCAATTCATACTCATGGGATTGGGTGAAGCCTTCGTAGAGGTTTCCAAAATTGAATTTTTCTATGACCAAGCCCCAGAAAGCATGAAGAGCCTTGGAACTTCGTTTTCCATTACTACAGTGGGAATTGGGAGTTACATCAGCACTTTTCTTCTCTCCACAGTTTCACACATCACTATGAAACATGGCCACAAAGGGTGGATTTTGAACAACCTCAATGCTTCTCATCTTGATTATTACTATGGATTTTTTGTTGTGCTAAACTTTCTGAATTTCATCCTCTTCTTGGTTGCTACTAAGTACTTCGTGTATAGAGCTGAAATTTCAGATTCCATAGATGTACTTGCTCAAGAACTGAAGGAGAAGAGAGCCAATGTGTCAAACCAAACGGTTCCGAGTGATTAG 1788 0.4245 MEEGRSLVSGYAQDGTVDLKGKPVLKSKRGGWRACSFLLVYEVFERMTYYGISSNLVLYLTKKLHQGTVTASDNVNNWVGTTYITPILGPYVADAHLGRYWTFVIASVIYLLGMCLLTLSVSLPSLRPPECHEMDVTKCKKATTLQLSVFYGALYILSVGGGGTKPNISTIGADQFDDFDPKEKAHKLSFFNWWFSSIFIGTLFAFTVLVYIQDNVGWALGYGIPTIGLAIALIAFLAGTPLYRHRLASGSSFTRIAKVIAAALRKRNEIVPVSPTELHELDVEEYTKKGKFRINSTPSLSFLNKACVKTSSSTSSEWMLCTVTQVEETKQILRMIPIWASTFIPSTMLAQTNTLFVKQGVTLDRHIGRFNIPPASLIAFTSFTMLVCVVLYDRVFVKIMKRFTKNPRGITLLQRMGTGIMIHIVTMIVASLTERHRLKVAKEHGVVEIGGQVPLSILILAPQFILMGLGEAFVEVSKIEFFYDQAPESMKSLGTSFSITTVGIGSYISTFLLSTVSHITMKHGHKGWILNNLNASHLDYYYGFFVVLNFLNFILFLVATKYFVYRAEISDSIDVLAQELKEKRANVSNQTVPSD 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00063 595 Gene3D MFS general substrate transporter like domains 7 571 IPR036259 -
Cca02g00063 595 Coils Coil 566 586 - -
Cca02g00063 595 PANTHER PEPTIDE TRANSPORTER 15 575 - -
Cca02g00063 595 Pfam POT family 100 529 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca02g00063 595 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 575 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca02g00063 595 SUPERFAMILY MFS general substrate transporter 23 560 IPR036259 -
Cca02g00063 595 CDD MFS_NPF5 32 565 IPR044739 GO:0042937|GO:0042938|GO:0071916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00063 Cca-Chr2 1036629 1045698 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00063 11 579 Organic Solute Cotransporters AT5G46040 62.522 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00063 - - gmx:100811610 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00063 02 1036629 1045698 Cca02g00063 02 1036629 1045698 ECH
Cca03g02237 03 43209834 43212922 Cca02g00063 02 1036629 1045698 PCT