Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02224 ATGTCCAATAACAACAAGGTGAAGGGCATCCTTAAAGGCCTAAGATTCATTTCTCAAATATTCGATAATGAGGACAAAGAAGAAATTCAGATTGGTCATCCAACGGATGTAAAGCATGTGGCGCATATTGGATGGGATGGTCATGGTCCTTCTGATAATAATCCCAGTTGGATGAACGAGTTTAAATCTGTCCCAGGAAATTCATCTGCACAAAATCATAATGGAGACATTCGTAGCAAAGGATCAGGCGATTCAGTTCAAAGTACCCCTGAAGGTTCAATGGAAAGAGGTTCTATGGAAAGAGGTTCAAAGTCATTGTATTGTCAAGGTCATGAGGACTCACGTGGTCGTGAGTTATCCAAGCAATCTAAGAAACAATCAAATTCAATGGGGCACCTAAGAGAGTCCCATGGAAAGGAAAAATCAGACAGACCAAGGAATCCTAAAAAAGCATCCAAACATGCACAGCCAAATGACTCATGCAATGATCATTCACAACCCATGCACACCGATGCTGATTCACTCCAACTCCAAGGGGGTGACCATTTGCCACCCAAAAAGTCTCGCCACAAAATTTCGAAAGAACACGCTTCCAATGTTGGTGGTGGTTCCTCCAAATTGAGATCAAAACACCCCCACCATTGTAGAGACACCGATTCTAATGAAGAAGGCCATTCTAGATCAAGTTCCAAATCTAGGAACAAACACGGGTCATTTGAAGAAGATGGGGAATTTGAGAGAGAGACTAGGAAACATGTACTGAAAAGTTGCCCAAATTAG 780 0.4205 MSNNNKVKGILKGLRFISQIFDNEDKEEIQIGHPTDVKHVAHIGWDGHGPSDNNPSWMNEFKSVPGNSSAQNHNGDIRSKGSGDSVQSTPEGSMERGSMERGSKSLYCQGHEDSRGRELSKQSKKQSNSMGHLRESHGKEKSDRPRNPKKASKHAQPNDSCNDHSQPMHTDADSLQLQGGDHLPPKKSRHKISKEHASNVGGGSSKLRSKHPHHCRDTDSNEEGHSRSSSKSRNKHGSFEEDGEFERETRKHVLKSCPN 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02224 259 MobiDBLite consensus disorder prediction 52 94 - -
Cca03g02224 259 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE 5 235 - -
Cca03g02224 259 MobiDBLite consensus disorder prediction 158 173 - -
Cca03g02224 259 ProSiteProfiles CRIB domain profile. 31 44 IPR000095 -
Cca03g02224 259 MobiDBLite consensus disorder prediction 106 157 - -
Cca03g02224 259 CDD CRIB 29 63 - -
Cca03g02224 259 Gene3D CRIB domain 25 77 IPR036936 -
Cca03g02224 259 MobiDBLite consensus disorder prediction 212 259 - -
Cca03g02224 259 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 5 235 IPR044510 -
Cca03g02224 259 SMART PBD_5 31 64 IPR000095 -
Cca03g02224 259 MobiDBLite consensus disorder prediction 41 259 - -
Cca03g02224 259 Pfam P21-Rho-binding domain 30 64 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02224 Cca-Chr3 43040766 43043198 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02224 - - gmx:102666244 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02224 03 43040766 43043198 Cca02g00989 02 26214107 26216100 PCT