Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02144 ATGAGAGATGAGAACTCGAAGAAGAGCAAGCTTTCTTGGCCAAAAACATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAACTGAGGATTTTCAGGCTGATGATGTTCTCTGCGAAGGTATTGATGAAGAGTGTAGTAGCAACTACTCAGAGAGGGAGGCATGCACCATTAGGAAAAGCAAATCAGAGAGATCAAGCAGATGGTACTCAGACAGAATACGAAGAGGTAAGAATGAACTTGATGAAGCTCAGGTTACAGATGTGTATAATTATAGGATCTTTGTTGCCACATGGAATGTAGCAGGGAAGTCACCTCCAACTTATTTGAGTCTTGAAGATTGGCTTCACACCTCTCCACCTGCCGACATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTTAATGCTGGTAATGTTTTGGGAACGGAAGACAATGGCCCTGCAAGAAAATGGCTAGCCCTTATTAGGAGGACCCTGAATAGCCTTCCTGGAACAAGTGGTGGGTGCCACACTCCTTCACCCCTCCCTAATCCTATTGTAGAGCTAGATGCTGATTTTGAGGAATCAATGAGGCAGAAGGCAACCTCCTTCTTTCAAAGGCGGTCCTTCCAATCCTTGAGTCGTAGTATGAGAATGGATAATGACATGTTAATACAACAAGCTTGCCTTGATCGCCGTCTCAGTGTTTGTGATAGAATGATACTAGGTCACAGAACGAGTGACTATGACCCCAATTATCGATGGGGTTCATCAGATGAAGAAAATGGCACTGGTGACTCCCCAATTACAACACATTATTCACCGGTATCTTATGGCGGTGGTTGTTTCTCTATGGAGGACAGTGATAGACAGACAGGACACTCAAGATACTGCTTGGTTGCTAGTAAGCAAATGGTTGGGGTATTTCTAACTGTTTGGGTGAAAAGTGATATAAGAGATGATGTTCACAACATGAAAGTGTCTTGTGTTGGCAGAGGGTTGATGGGATATCTAGGAAACAAGGGATCAATATCAATTAGTATGTCATTGCACCAAACAAGCTTTTGCTTCATTTGTAGTCATTTGACTTCTGGACAAAAGGATGGTGATGAGTTAAGGAGAAATTCAGATGTAATGGAGATTCTCAGGAAAACAAGGTTTCCCCAGGTCCATGACATGGGTGATGAGAATTCTCCTCAGACAATTCTGGAACATGATCGAATAATTTGGCTCGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCCAAAGCTCTTGTAGAGATGCATGATTGGAAAACTTTGTTAGAGAATGACCAGCTGTGTATTGAGCAGAGGCAAGGTAGAGTCTTTGAAGGATGGAATGAAGGGAAAATATATTTCCCTCCCACATATAAGTATTCAAACAATTCAGACAGATATGCCGGTGATGACAGACGCTCAAAACAAAAGAGAAGAACTCCCGCATGGTGTGATCGTATCTTGTGGTATGGAAGAGGCCTGCACCAATTATCATATGTTCGTGGGGAGTCAAGATTCTCTGATCATAGGCCAGTTTATAGCATATTCTTGGCAGAAGTTGAGTCTATTAGTTGTAACCAAATGAAGAAAAGCTCCGGTTCCAGGATTGAACTGAGTGTACCAAACAAGGTAGGCTATACAATGAGGACTGAGGAGTTGCTAGTCACTATGATGAAAGTGACATTCTGTTACCCTCACACTCCCAAAGAAGCTGCAGAGTTTGTGGACGAGTACACGAAACTTGTGTGTACATGCATGGGTCAAAGAAGACAAATAGCATTTCTCAATTCTCATGATGACAAAATGATTTGA 1818 0.4224 MRDENSKKSKLSWPKTLVKKWFNIKSKTEDFQADDVLCEGIDEECSSNYSEREACTIRKSKSERSSRWYSDRIRRGKNELDEAQVTDVYNYRIFVATWNVAGKSPPTYLSLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRRTLNSLPGTSGGCHTPSPLPNPIVELDADFEESMRQKATSFFQRRSFQSLSRSMRMDNDMLIQQACLDRRLSVCDRMILGHRTSDYDPNYRWGSSDEENGTGDSPITTHYSPVSYGGGCFSMEDSDRQTGHSRYCLVASKQMVGVFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDELRRNSDVMEILRKTRFPQVHDMGDENSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMHDWKTLLENDQLCIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDDRRSKQKRRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRPVYSIFLAEVESISCNQMKKSSGSRIELSVPNKVGYTMRTEELLVTMMKVTFCYPHTPKEAAEFVDEYTKLVCTCMGQRRQIAFLNSHDDKMI 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02144 605 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 540 - -
Cca03g02144 605 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 540 IPR045849 GO:0004445|GO:0046855
Cca03g02144 605 SUPERFAMILY DNase I-like 81 530 IPR036691 -
Cca03g02144 605 SMART i5p_5 225 526 IPR000300 GO:0016791|GO:0046856
Cca03g02144 605 Pfam Endonuclease/Exonuclease/phosphatase family 96 511 IPR005135 GO:0003824
Cca03g02144 605 Gene3D Endonuclease/exonuclease/phosphatase 70 213 IPR036691 -
Cca03g02144 605 Gene3D Endonuclease/exonuclease/phosphatase 264 545 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02144 Cca-Chr3 41964324 41968469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02144 124 491 Acyl Lipid Metabolism Gene Families AT2G43900 25.823 5.20e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02144 - - gmx:100790043 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02144 03 41964324 41968469 Cca03g02144 03 41964324 41968469 ECH
Cca03g02144 03 41964324 41968469 Cca02g01117 02 28459797 28463763 PCT