Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02136 ATGCTGCTGAGGAACAGATCAAGGGCAGTGACCAAGCCAGGTTTGATGGCTGATCATAGCTCCTCTCAACAACCCCCTAATCAAACCTATGCTAAAACCATACCCTCTTTATTTGGCTCACCAAAGTTCAGAGATTTCACCACCAAGTGTCTTTCAGGAACCGAGGCTTTAAGAAGTCCAACTTCAATTCTTGATGCCAAAGCATTATCCCCTTTTGTTGCCTTTGGAAACCCGTTTTCAACTCTTCCCCACAAAACCTCTCCACCAAACAGAACCTTATGGGACAAGCCAGATTCAAAGGGCATTGGCCTTGGTCTTGTGGGTGCTCTCAAAGATGATGATGACCCAATTTGTCACAATTCTGAACCCAACAAAGGAAACGTCCTGCTAAGAGTGAAAATCCCGTGTGCTGATGAAGATTTTGAGAACAAAACCAAGGATTCAGGATCGGGAATTTGTGCAACAAAGGATTGTTCTTGTGCTTCTCCAAGTGCTGGAGTTGTGTCTTGGGGTGAGATGGAGCTTTCTGAGGAATATACATGCGTGATATCTCATGGACCTAACCCAAGAACCACACACATATTCAATAATTGCATTGTGGTGGAGACATATTGTTCTCTCCCTCAAAACCAAAACTCTCACTCTGCTTTTGCCTCGGCAAATTTCCTCAGCTTCTGTTACACTTGCAAGAAACATCTTGACCAAACAAAGGACATCTTTATTTATAGGTACATACACTTATCTAATCTCCCAACCTTTGCGATTTGCATCATTAATGTTTATAAACTTAAACAGTTACAAGTTTCTTTAAGTCTGATAAGTACTTCTACCTTATATCTAAACAATTTTTATGTCATGTTCTATTCATCAATTAATACCCCCAACATGCACAATACTTTATGA 903 0.4075 MLLRNRSRAVTKPGLMADHSSSQQPPNQTYAKTIPSLFGSPKFRDFTTKCLSGTEALRSPTSILDAKALSPFVAFGNPFSTLPHKTSPPNRTLWDKPDSKGIGLGLVGALKDDDDPICHNSEPNKGNVLLRVKIPCADEDFENKTKDSGSGICATKDCSCASPSAGVVSWGEMELSEEYTCVISHGPNPRTTHIFNNCIVVETYCSLPQNQNSHSAFASANFLSFCYTCKKHLDQTKDIFIYRYIHLSNLPTFAICIINVYKLKQLQVSLSLISTSTLYLNNFYVMFYSSINTPNMHNTL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02136 300 MobiDBLite consensus disorder prediction 1 28 - -
Cca03g02136 300 Pfam zinc-finger of the FCS-type, C2-C2 213 244 IPR007650 -
Cca03g02136 300 ProSiteProfiles Zinc finger FLZ-type profile. 221 300 IPR007650 -
Cca03g02136 300 PANTHER FCS-LIKE ZINC FINGER 8 2 243 IPR044593 -
Cca03g02136 300 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 2 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02136 Cca-Chr3 41911150 41913625 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02136 - - gmx:100788456 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02136 03 41911150 41913625 Cca03g02136 03 41911150 41913625 ECH
Cca03g02136 03 41911150 41913625 Cca02g01121 02 28524548 28526472 PCT