Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01121 ATGCTGGTGAGAAACAGATCAAGAGCTGTGACCAAGGCAGGTTTGATGGGTGATCACAGCTCCCAGCCATGTCCAAATCAGAGTTACAAACGAAACATCCCTTGTCTATTTTTTTCACCCAAATTTCGAGACTTGACTATGAAGTGTCTCTCCGGAGCGGAGGCTCTGCCAAGTCCCACATCAATTCTCGACACCAGAGCCTTGTCCCCCTTGGGGAACCCTTTGCCACATGCAAACAAGACTGAACCGATTAATAATATCTCCCCAAGAACACACTCGGAAAACAAAACTGTGTGGGACTCAAAAGGCATTGGCCTTGCACTTGTTGGTGCACTAGTACTTAAAGATGAACCTGTTGCTCAAAATTCAGCTAAACCAAGTAATGGAACTGTTCTGTTTGGAACTAAGCTTGGAGTGAAGATCCCTCCCCTGCCACTGCCACCACCATGTGCTGCTGCAGATTTTGATGCCAAAACAAAGGATTCTCCATTATCAGTTGGAAGAGGTGTTATGAGTTTGAGTGAGATGGAACTTTCTGAGGAGTACACCTGTGTGATATCACATGGACCTAATCCTAAAACAACTCATATATTTGATAATTGTATTGTGGAAAGCTACTGTTCTCTGCCCAATAACCCCAACACTCCTTCACTGAATTTCCTTAGCTTCTGCCACACATGCAAGAAGCATCTTGAGCAGACAAAGGACATCTTTATTTACAGAGGAGAAAAAGCTTTCTGTAGCCAAGAATGTCGCCACCAAGAGATGGTGCTAGATGAAGCAGGAACAGGAACAGGAACTTCAGAATTTGACAGATACTAA 822 0.4416 MLVRNRSRAVTKAGLMGDHSSQPCPNQSYKRNIPCLFFSPKFRDLTMKCLSGAEALPSPTSILDTRALSPLGNPLPHANKTEPINNISPRTHSENKTVWDSKGIGLALVGALVLKDEPVAQNSAKPSNGTVLFGTKLGVKIPPLPLPPPCAAADFDAKTKDSPLSVGRGVMSLSEMELSEEYTCVISHGPNPKTTHIFDNCIVESYCSLPNNPNTPSLNFLSFCHTCKKHLEQTKDIFIYRGEKAFCSQECRHQEMVLDEAGTGTGTSEFDRY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01121 273 MobiDBLite consensus disorder prediction 1 24 - -
Cca02g01121 273 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 2 261 - -
Cca02g01121 273 Pfam zinc-finger of the FCS-type, C2-C2 214 261 IPR007650 -
Cca02g01121 273 MobiDBLite consensus disorder prediction 79 94 - -
Cca02g01121 273 MobiDBLite consensus disorder prediction 73 95 - -
Cca02g01121 273 ProSiteProfiles Zinc finger FLZ-type profile. 219 263 IPR007650 -
Cca02g01121 273 PANTHER FCS-LIKE ZINC FINGER 8 2 261 IPR044593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01121 Cca-Chr2 28524548 28526472 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01121 - - gmx:100811607 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01121 02 28524548 28526472 Cca02g01121 02 28524548 28526472 ECH
Cca03g02136 03 41911150 41913625 Cca02g01121 02 28524548 28526472 PCT