Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02135 ATGATCCTACTTGCCAGATTATCCATCGTCGAGAAGCCCCTACTCATCATTCTCCAAGAAAAAATTTTAGCTTTCGGTGGTGCCAGGATGGACCAGATAATGCTAGGTGCATCATTATTGGATCCTACAACAGCTTTAGAGTCTGAAAAGCAGGCACAGTTACCCATCCCACTTTCACACACACCTTCTTCCAATTCCATCATCTTCATTCTTCTTTTCCTCATTGCTACCTACACTCCTCCACTAATCGGTTTTGATTTGGTCCCGGGAGATCTGGTTTTGGGGGTCATTTCCGACACCTCCTCGTACTGGGATCTAGTGTACAAAACATCGTTGTTCATGTTACAAATGGAGACACTCGTTGTGGTGGCGCAGCATAGGAACCAATACTGCAGCAGGTCGAAACCCCAAGGGCACGCTTCACCCTCCAGAGACTTTAGAGCCATAAATCGCACAACTTTTCAAACGGGGTGTGGTATTCTACCAACCCCACTCAAATCCCACACTTCACCGTTAACTAAATACCCTTCTTCAGATTCCTCCAAAACACCGTTAACCCCTTCAAACACAATCAAAACCCGTTGCAAAACCACTCCCAGAAGTGCCCCAGTTCCCATCAATCACAAAAGGGAGAGATGCTTCACTGAACATGTTTCTGATGGGGGCATTTTGCTCTCTGAACTTTGGGCTGGTCCTACGTATTCCAATTCTCCACCACCTAGTTCCTTGCCTATTCCCAAGTTTTTTGTAAAACCAAAGAGAAGTGTGTCCCTTGATCTCCCTGGTTCTTGTCCTGAAGTGGAAATGCAGTTACATGCTAAGTCTGCACCTTCCTCCCCTCGCAGGGAGGATTCCCCTTATGCCGGAGATATCTTTGATTCTGCGACGATGGATCTGCGTCGCATTCTCAATCTTAACTTGGATGATGAATGA 933 0.463 MILLARLSIVEKPLLIILQEKILAFGGARMDQIMLGASLLDPTTALESEKQAQLPIPLSHTPSSNSIIFILLFLIATYTPPLIGFDLVPGDLVLGVISDTSSYWDLVYKTSLFMLQMETLVVVAQHRNQYCSRSKPQGHASPSRDFRAINRTTFQTGCGILPTPLKSHTSPLTKYPSSDSSKTPLTPSNTIKTRCKTTPRSAPVPINHKRERCFTEHVSDGGILLSELWAGPTYSNSPPPSSLPIPKFFVKPKRSVSLDLPGSCPEVEMQLHAKSAPSSPRREDSPYAGDIFDSATMDLRRILNLNLDDE 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02135 310 Pfam Proline-rich nuclear receptor coactivator motif 229 248 - -
Cca03g02135 310 PANTHER - 116 310 - -
Cca03g02135 310 MobiDBLite consensus disorder prediction 163 204 - -
Cca03g02135 310 MobiDBLite consensus disorder prediction 163 197 - -
Cca03g02135 310 PANTHER BNAA03G57290D PROTEIN 116 310 - -
Cca03g02135 310 MobiDBLite consensus disorder prediction 271 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02135 Cca-Chr3 41895122 41899234 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02135 - - gmx:102659741 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02135 03 41895122 41899234 Cca03g02135 03 41895122 41899234 ECH
Cca03g02135 03 41895122 41899234 Cca02g01122 02 28530728 28531315 PCT