Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01122 ATGGAGACTCTATTTGTTGTTGAGCAGCATAAGAACCAATACTACAGCAGGTCCAAGTCACAGGGTCATGCTCGATTTGGGTCTTCACCTAATAGGGGCTTTAGGGATATCAATTGCAGGACTTTTGAGTCTGGGAGGACAGGTATATTGCCAACTCCTTTGAAATCTCACAGATCCCCTAAAACACCACCTAATTCTGATAACAAAACGGTGGGGAAACTAAAAGTTACTCCTAAGAGCACCCCAATTCCTATCAGTGGCAAAGCTCGTAGGAAAGAGAGTGAAGATGTCCCTGCTGGAGGAGGCCTTTTGTTTTCTGAGTTATGGGCTGGACCTACCTACTCAAATTCACCACCTCCCAGTTCGTTGCCAATTCCCAAGTTTTCTGTCAGACCAAAGAGGACTGTGTCTCTTAATCTTCCTGGTTCCCCCCCTGAGATTGAAATGCGCCCGGTGGCTAAGTCTGCGCCCTCTTCCCCTAGCAGGGAGCATTCTGATTCGCCTTTTACAAGGGATCTGTTTGTTAATGCTTATTCTGCTACTAAGACCCTGTGTCGCATTCTTAATCTTAACATCAATGATGACTGA 588 0.4592 METLFVVEQHKNQYYSRSKSQGHARFGSSPNRGFRDINCRTFESGRTGILPTPLKSHRSPKTPPNSDNKTVGKLKVTPKSTPIPISGKARRKESEDVPAGGGLLFSELWAGPTYSNSPPPSSLPIPKFSVRPKRTVSLNLPGSPPEIEMRPVAKSAPSSPSREHSDSPFTRDLFVNAYSATKTLCRILNLNINDD 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01122 195 Pfam Proline-rich nuclear receptor coactivator motif 109 128 - -
Cca02g01122 195 MobiDBLite consensus disorder prediction 59 75 - -
Cca02g01122 195 MobiDBLite consensus disorder prediction 139 168 - -
Cca02g01122 195 MobiDBLite consensus disorder prediction 14 97 - -
Cca02g01122 195 PANTHER BNAA03G57290D PROTEIN 1 195 - -
Cca02g01122 195 PANTHER - 1 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01122 Cca-Chr2 28530728 28531315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01122 - - gmx:100791409 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01122 02 28530728 28531315 Cca02g01122 02 28530728 28531315 ECH
Cca03g02135 03 41895122 41899234 Cca02g01122 02 28530728 28531315 PCT