Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02127 ATGAAGGAGTTTCCTTCTTGTTTTGGAGAAAATGGTGTTCAGGTTGTTGATTCCTCCTATTCAAGCACCACAAGGGGAGCTCAAAATGCGGTCACTTGTGTCTATCAGTGTAAGTTAGGAGGCCGTTCATGCTTGATTACTGTCTCATGGACCAAAAATTTGATGGGACAAGGCTTGAGTGTGGGAATAGATGAGTTGGGAAATCATTGCCTTTGCAAGGTTGATATAAAGCCATGGTTGTTCTCAAAGAGGAAAGGGTCTAAGAACTTGGAGGTTGAATCTAACAAGATTGACATACTTTGGGACTTGAGCTGTGCTAAATTTTGTTCTGGGCCAGAACCATTGGAGGGATTTTACCTAGCTGTTGTGTTCAACCAAGAGATGGTGTTACTTCTAGGGGATCTGAAAAAGGAGGCATGCAAAAAGATTGATGGTGACTATGCTTGTGTTCACTCTGGTGCCGTTTTTATTGCAAAGAGAGAGCACATTTTTGGAAAGAAGTTTTATGGTGCAAAGGCTCAGTTTTGTGACAAGGGCCAAGTGCATGATGTGAGAATTGAGTGTGACACACTAGGGCTTAATGATCCGTGTCTTGTGATCCGAATTGATAGCAAGACAGTGATGCAGGTGAAGCAACTCAAGTGGAAGTTCCGGGGCAACCACACCATATTGGTGGATGGATTTCCTGTGGAAGTGTTTTGGGATGTACATAATTGGCTCTTTGGAAATGCTATGGGGAATGCAGTTTTCATGTTCCAAACTTGCATTTCAACTGAGAAATTGTGGGCAAGCCAATCTGTTTCGGATCCTTCTGTTCTGACATGGGCTTATTCTCAGCAGTTCAGGGATTCTCAGTTGCAAGGTCTTGGATTTTCTCTCGTTTTGTATGCTTGGAAGAATGAATAG 906 0.4283 MKEFPSCFGENGVQVVDSSYSSTTRGAQNAVTCVYQCKLGGRSCLITVSWTKNLMGQGLSVGIDELGNHCLCKVDIKPWLFSKRKGSKNLEVESNKIDILWDLSCAKFCSGPEPLEGFYLAVVFNQEMVLLLGDLKKEACKKIDGDYACVHSGAVFIAKREHIFGKKFYGAKAQFCDKGQVHDVRIECDTLGLNDPCLVIRIDSKTVMQVKQLKWKFRGNHTILVDGFPVEVFWDVHNWLFGNAMGNAVFMFQTCISTEKLWASQSVSDPSVLTWAYSQQFRDSQLQGLGFSLVLYAWKNE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02127 301 PANTHER EXPRESSED PROTEIN 1 300 IPR008586 -
Cca03g02127 301 Pfam Plant protein of unknown function (DUF868) 27 299 IPR008586 -
Cca03g02127 301 PANTHER PLANT/T24G3-80 PROTEIN 1 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02127 Cca-Chr3 41727976 41729669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02127 1 301 EF-hand Containing Proteins AT5G28150 61.056 7.37e-124 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02127 - - gmx:100786850 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02127 03 41727976 41729669 Cca03g02127 03 41727976 41729669 ECH
Cca03g02127 03 41727976 41729669 Cca02g01131 02 28618887 28620157 PCT