Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01131 ATGAGGGAGTTTCCTTCTTGTTTTGGAGAAAATGGGGTTCAGGTTGCTGACTCATCCTCATCAAGCACCACAAGAGCATCTCAAAATGTGGTTACTTGTGTCTACCAGTGCAAACTAAGAGGCCGTTCTTGCTTGATTACAGTCTCCTGGACCAAAACTCTGATGGGTCAAGGCTTGAGTGTGGGAATTGATGACTTGGGGAACCATTGCCTCTGCAAGGTTGAGATAAAGCCTTGGCTCTTCTCAAAGAGGAAAGGGTCCAAGAATTTGGAGGTCCAATCTGGTAAAGTTGACATCTTTTGGGATTTGAGTTGTGCCAAGTTTGGTTCAGGGCCTGAGCCATTGGAGGGGTTCTACTTGGTGGTTGTGTTCAACAAGGAGATGGTGCTGCTCCTAGGGGATCTGAAAAAGGAGGCATGCAAGAAGATTGAGAGTGATTGTGATTTTTCTCACTGTGATGCCGTTTTCGTTGCAAAGAGAGAGCACATTTTTGGGAGGAAGTTTTATGGTGCAAAGGCTCAGTTTTGTGACAAGGGGCAAGTGCATGATGTCACAATTGAGTGTGACACTGTGGGGCTTAACGATCCCTCTCTTGTGATTCGGATTGATAGCAAGACAGTGATGCAGGTAAAGCGTCTCAAGTGGAAATTCAGAGGGAATCACACCATTTTGGTGGATGGGGTTCCGGTTGAAGTGTTTTGGGATGTGCATAGTTGGCTCTTTGGGAATGCTATGGGAAATGCAGTGTTCATGTTTCAAACATGCATTTCAAGTGACAAGCTTTGGGAAGGTCAATCAGTTTCTGATCCCTCTGCAATATCATGGACTTCTTCTCAGCAGTTTAGGGATTCCCAGTTGCAAGGCTTTGGCTTCTCTTTGATTTTGGATAAGCCCTTTAAGCCTTTGGCGATGGACTAA 918 0.4542 MREFPSCFGENGVQVADSSSSSTTRASQNVVTCVYQCKLRGRSCLITVSWTKTLMGQGLSVGIDDLGNHCLCKVEIKPWLFSKRKGSKNLEVQSGKVDIFWDLSCAKFGSGPEPLEGFYLVVVFNKEMVLLLGDLKKEACKKIESDCDFSHCDAVFVAKREHIFGRKFYGAKAQFCDKGQVHDVTIECDTVGLNDPSLVIRIDSKTVMQVKRLKWKFRGNHTILVDGVPVEVFWDVHSWLFGNAMGNAVFMFQTCISSDKLWEGQSVSDPSAISWTSSQQFRDSQLQGFGFSLILDKPFKPLAMD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01131 305 MobiDBLite consensus disorder prediction 1 20 - -
Cca02g01131 305 Pfam Plant protein of unknown function (DUF868) 27 295 IPR008586 -
Cca02g01131 305 PANTHER EXPRESSED PROTEIN 1 295 IPR008586 -
Cca02g01131 305 PANTHER PLANT/T24G3-80 PROTEIN 1 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01131 Cca-Chr2 28618887 28620157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01131 1 295 EF-hand Containing Proteins AT5G28150 60.269 3.00e-121 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01131 - - gmx:100793503 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01131 02 28618887 28620157 Cca02g01131 02 28618887 28620157 ECH
Cca03g02127 03 41727976 41729669 Cca02g01131 02 28618887 28620157 PCT