Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02105 ATGGCTTCTCTTCATCGAGATGATGCTGAAGTTGCTTTTGAAGAAGGAATGCTCTGTTTACCCTCCCATGTTCTTGACGAGGCATGTGATCACTCCAAGAACCACCACCAAAGACAGAAGCAACAAGGCTACCACAGGGACCCACAGTTTCAGTACTCAAAATCTATTCCATGGGCAAGATCATCATCATATCAAAGGTCGAAACATGCGACAGGTGGGCCTGGGATGCAAGCTGTTTTCTTAGTCTCTGGGCAAGGATCATGTGGCACTGGAGTTTTCTTACCCCAAAAAGCAGCCACAAAATCAACTAGGAAGCCAGCGTGCGCTCCTGTCCTCCTTCCAGCTCGAGTTGTTCAAGCTCTAAATCTTAAAGTGCATCAATTAGGCCTGCAGATTTCACCTTCTCAAGGTCCCAAATGTAGCCCACGACGTGGAGAAGAAGCATACAGTGGTGAGTCAGAGAAAAAGAAAAACGATGAGAAAGATGGGATGAAGCAATGCAGTGTTATTAGTCAGAGTCAAAGCTCTTCTGCTGAGATATTTCTTCCAAAGGAATGGACGTATTAG 567 0.4568 MASLHRDDAEVAFEEGMLCLPSHVLDEACDHSKNHHQRQKQQGYHRDPQFQYSKSIPWARSSSYQRSKHATGGPGMQAVFLVSGQGSCGTGVFLPQKAATKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSQGPKCSPRRGEEAYSGESEKKKNDEKDGMKQCSVISQSQSSSAEIFLPKEWTY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02105 188 PANTHER TIP41-LIKE PROTEIN 37 188 - -
Cca03g02105 188 MobiDBLite consensus disorder prediction 145 164 - -
Cca03g02105 188 MobiDBLite consensus disorder prediction 133 177 - -
Cca03g02105 188 PANTHER OS01G0850000 PROTEIN 37 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02105 Cca-Chr3 41360108 41362990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02105 - - gmx:100781513 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02105 03 41360108 41362990 Cca02g01141 02 28823781 28826176 PCT