Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01141 ATGGCTGCTATTCATGATGATGGTGAAGTTGGTTTTGAAGAAGGAATGCTCTTGTTACCCTCTCATGTTCTCCACGAAGCATGCGGCACTAAGGTGTGTATGAGGAACCGTCAGCAAATGCATCAGCACCGTCATCACAAATCAACTGGAGAACCAAAATCACAGAACTCAAAATCTACCTCAAGATCTTCGTATCAAAGGCCAAAACTTGCCAATGGTGGACCTGGAATGCGAGCTATTTTCTTAGGATCCGGGCCTAGATCATGTGGCACTGGCGTCTTCTTACCCCAAAGAGCAGGCACAAACTTCCAACCAAGCAAGAGGCCAGCTTGTGCTCCTGTTCTCCTTCCAGCCCGAGTTGTTCAAGCACTAAATCTTAATGTGCATGCATTAGGTGTGCAGATTTCACCCCCGCAAGTTCAGAGATATAACCCAACATGCAGAGCAGCATACAGTAATAATTCAATAGAAAAGAAAAGTGATCAGAAGGATGCGTCCAAGCAATGTAGTTTTATTTCTCAGAATCAAAGCTCTTCTCCAGAGATATTTCTCCCAAAGGAATGGACTTACTAG 573 0.445 MAAIHDDGEVGFEEGMLLLPSHVLHEACGTKVCMRNRQQMHQHRHHKSTGEPKSQNSKSTSRSSYQRPKLANGGPGMRAIFLGSGPRSCGTGVFLPQRAGTNFQPSKRPACAPVLLPARVVQALNLNVHALGVQISPPQVQRYNPTCRAAYSNNSIEKKSDQKDASKQCSFISQNQSSSPEIFLPKEWTY 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01141 190 MobiDBLite consensus disorder prediction 38 77 - -
Cca02g01141 190 MobiDBLite consensus disorder prediction 53 68 - -
Cca02g01141 190 PANTHER OS01G0850000 PROTEIN 37 190 - -
Cca02g01141 190 PANTHER TIP41-LIKE PROTEIN 37 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01141 Cca-Chr2 28823781 28826176 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01141 - - gmx:100800052 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02105 03 41360108 41362990 Cca02g01141 02 28823781 28826176 PCT