Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02101 ATGGAATCAAGTCATGTAATAGCGATTACAAATGGAGAAGAGAATATTGGAGATAGGAATAAGGAGAATAAAACATTCCAATTTCGACTTCCACCCACTATTTCCCATCTTGGGAAAAATGCAGTCCACTGTGTCTCCATTACTTCCAATCTGAGACAGAAGCATATGCAAAGTGAGCATGACACGAGGAAGAAGATCCACTGCATCAAAGTGGGAATCTCCTTGGCTTTGGTTTCACTTCTATACCTCTTGAATCCTCTCTTTGATCAAGTTGGAGAAAATGCAATGTGGGCTATCATGACTGTTGTCGTCATGTTTGAATTCTCCGCAGGTGCAACACTAGGTAAGGGCCTCAATCGAGGATTAGGAACAATTATAGGAGGAGGACTTGGTTCCTTAGCAGCATTTTTTGCCCAAAGCATTGGAATGGGCAGGGTTGGCAATTCGATCATAATCGGTGCTTCGGTATTTATATTTGGATCTGTTGCAACATATCTTCGACTGGTTCCAAGCATAAAGAAAAGATACGATTACGGAGTGATGATATTCATTCTAACTTTTAACCTAGTTGTGGTTTCTGGCGTACGAGTTCACATGAAAGTGTGGGATATAGCTCGCGAACGGCTCTTGAATATTCTGATTGGGTTCATTGTGTGTGTTTGTGTGAGTTTGTTCGTCTTTCCTTTGTGGGCCAGTGATGAACTTCATCATTCCATAGTCTCAAGATTCCTCGACCTTGCTAATACAATTCAAGATTGTTCAGGCGAATGCACAAAAAACGTTAGTGAAAAAGAAAACCAACCTGGTACTAACTTGAACGTTTGCAAGTCGGTGTTGAACACCAAGTCAAAAGATGAATCATTGGCAAATTTCGCAAAATGGGAACCCTGGCATGGAAAATTCGGATTTTGCTACCCTTGGGGAAGGTACTTAAAGATTGGTGAAATGCTTCGAGAACTAGCTGCGTTTATTCTTGCAGTGGGACGTTGCCTTGAAGCATCAAAAGAGCCCATGGCTTGTTTGAGAGAATCGCAATGGGTGCAATTAGAAACATGCGAAGCAATTGAGTCGAGGGTTGCATGCATTGTGCGAGGACTTGGAGAAAGCATGAAGCAAATGAGGAAATGTGATGCAAAGGAAAGCATGTTGGCACAGTTGAAAGCCGCGAGGACAGATTTGATGATGCTAATTTCCACGTCCAAAATGGTAGAACTTGAGGATGAACAAGTTGTTGCAATTGGTAGCTTCGTCTTCTTGCTCATGGAAGTGATAGGGAAGGTAGAGGAATTGGTGAAGGAGGTGGAGGACCTTGGTGATGTCGTTGCTTTTAGCACCCCAACAACTCCATTGTCTTCGTAG 1359 0.426 MESSHVIAITNGEENIGDRNKENKTFQFRLPPTISHLGKNAVHCVSITSNLRQKHMQSEHDTRKKIHCIKVGISLALVSLLYLLNPLFDQVGENAMWAIMTVVVMFEFSAGATLGKGLNRGLGTIIGGGLGSLAAFFAQSIGMGRVGNSIIIGASVFIFGSVATYLRLVPSIKKRYDYGVMIFILTFNLVVVSGVRVHMKVWDIARERLLNILIGFIVCVCVSLFVFPLWASDELHHSIVSRFLDLANTIQDCSGECTKNVSEKENQPGTNLNVCKSVLNTKSKDESLANFAKWEPWHGKFGFCYPWGRYLKIGEMLRELAAFILAVGRCLEASKEPMACLRESQWVQLETCEAIESRVACIVRGLGESMKQMRKCDAKESMLAQLKAARTDLMMLISTSKMVELEDEQVVAIGSFVFLLMEVIGKVEELVKEVEDLGDVVAFSTPTTPLSS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02101 452 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 3 444 - -
Cca03g02101 452 Pfam Aluminium activated malate transporter 59 432 IPR020966 GO:0015743
Cca03g02101 452 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 3 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02101 Cca-Chr3 41294569 41297746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02101 51 438 Miscellaneous Gene Families AT1G08440 37.659 1.70e-83 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02101 - - gmx:100802201 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02101 03 41294569 41297746 Cca03g02101 03 41294569 41297746 ECH
Cca03g02101 03 41294569 41297746 Cca02g01143 02 28878070 28881816 PCT