Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02094 ATGGAGATTTTGAATGTAATAACAGCGGCTCTAACATTCCTAGCACTAGTGCCAAAGATGGAGAGCCATAAAGAGCCCTCATCAGTTGTTCCTATTCCAACAACCCCTCGTCCACTTTGTGCATCACAATTTGCCCTAGTGAACTATGCATGTTCGAGGCTTCCATTCAGACATGGAGTACCACCTGATTCTCAATCACCTCCGCCACCCCCTGATGATGAGGAGGGTcacaatgacaacaacaaggacgacaaccacaatcacagtcacaagcacaggcatggacacaaacacaggcaccaccaaacCCCTGATGAAGATAACTGTTGCAGGTGGGCCAAGGAAGTGGACAACCAATGTGTGTGTGAACTTCTAGCGCGCTTGCCACCTTTTCTCATCAGACCCTTGCATCAGTACACGCTCGACATTGGAGAATCATGTCATATCACTTACTCATGTGGTTCGCCAATATGA 474 0.3945 MEILNVITAALTFLALVPKMESHKEPSSVVPIPTTPRPLCASQFALVNYACSRLPFRHGVPPDSQSPPPPPDDEEGHNDNNKDDNHNHSHKHRHGHKHRHHQTPDEDNCCRWAKEVDNQCVCELLARLPPFLIRPLHQYTLDIGESCHITYSCGSPI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02094 157 MobiDBLite consensus disorder prediction 70 86 - -
Cca03g02094 157 MobiDBLite consensus disorder prediction 57 105 - -
Cca03g02094 157 PANTHER - 2 157 - -
Cca03g02094 157 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02094 Cca-Chr3 41230695 41231465 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02094 - - gmx:102669806 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02094 03 41230695 41231465 Cca02g01153 02 28952154 28952672 PCT