Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01153 ATGGAGAGCCAGTTCATGCCACCATTTATTCCTTTGCCATCTCCATCTCTTCACCCACTTTGTTTATCCCAACTAGCACTAGTAAACTATGCTTGTGCAATGTTGCCTCTCAAGGCAACACCTCCATCTTTACCACTCACACCTTCACCCTCTCCTTCGTCCCCTAATGCTGATGAGGGACACAGGAGTCACCAAACTTCTCAAGAAGATGAATGTTGTAGGTGGGCTAGAGAAATAGACATCCAATGTGTATGTGAAATCCTAGTTCTATTGCCTCCCTTCCTTTCTAAACCTTTGCATCAGTACTCAATCAGCATTGGAGAATCGTGTAAGGTCACTTATTCGTGCGGTGGGCCAAAATGA 363 0.449 MESQFMPPFIPLPSPSLHPLCLSQLALVNYACAMLPLKATPPSLPLTPSPSPSSPNADEGHRSHQTSQEDECCRWAREIDIQCVCEILVLLPPFLSKPLHQYSISIGESCKVTYSCGGPK 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01153 120 PANTHER - 1 119 - -
Cca02g01153 120 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 119 - -
Cca02g01153 120 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01153 Cca-Chr2 28952154 28952672 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01153 - - pvu:PHAVU_007G170000g 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02094 03 41230695 41231465 Cca02g01153 02 28952154 28952672 PCT