Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02091 ATGCCGCCTAGTCGGAGAAAGGGCGGAAAAAACCCGCCGGCGGCGGTGGCGGCCGCATGCCGCCAGTTTAAGCTCGGCGATCTCGTGCTAGCCAAGGTCAAGGGATTCCCTGCTTGGCCTGCGAAGGTGAGTGAGCCGCAGAAGTGGGGTTTCTCTGCTGATCAGAAGAAAGTATTTGTTTACTTCTTTGGAACCCAACAAATAGGTTTCTGCAATCCAGCTGATGTTGAAGCATTTACTGAAGAGAAGAAACAATCTTTTTCCAAACGTCAAGGAAAGGCTGGTGAATTTGCTCGTGCAGTGAAGGAGATTATTGAAATTTATGAAAAACTGAAGAGAGGAAATACAGATGCTGACACTAGCTCTGGCGTTGAAGTTGCTAGTGTAGATGAGTCAAATCCGCCTGATCCATCTGCCAACATGGGGTTAAAGGATCAGATGGATGCTCCTTTGACAATTGATTCACAAATGACATCTTCAAATTGTGCAGTTGACCGACCTGAGCTATGTGCAGCTGAGGATGACTCAGCTGTTGCATTGAGGGATGAATCTTATAACATAGAGGCATCATTGGAGGAACCCATTGATAATGGTATTGTGACTTCAACTGTAAAGTCACATTTTTCTATAACTCAGGGAAATAATGGTGGCAACAGTGATGGCAACATACCAGCTGATGCAATTCAGAATATGTCTATAAGAAGGAGTAAACGTATCAGGAAATCACCTGACCTTTTAGGTTGTGATGATACTGATTCACCTGCATTTGCCTCAAATGTTAGCATGGGGGACAATGATTCTGAAATCATTACAATCAATTCTGATGCTGTTAGCTTAAATGAGGGATGTCCAATAGATTCTAATTTAAAACTTGAACAGTCTGAGCCTATTGAGTGTCCTGACGGGAAAGATGATTTGAACAAAGGCCTTGATCTTGAAATAAAGGCTGTTATCAACAAGAAGAAAAGAAAACTAAACAGGAAGAAGGAAACTAATGATGCTGCTTCTCAGAATGCCAGTCAAGGTTTGCAGAATATGGGTGGAAATTCAAAAGAGAGATGCCCTGACCCAGATGGAGATGAGCACTTGCCCCTTTTGAAACGAGCCAGAGTTAGAATGGGTAAATCATCTGCAGAGACAGAAATCAATAGCGTTGTACAAGTTGAGGTGAAAAATGGTAAGGAAGATATTACTGACTCACCCCAGCAGATAATCACATCCTCAAATTGTGAAAATGGTAGCCTTGCTGAAGGAGGCTCATCAGTGTTGAATGAAGCTTTGGTAAATGTTTCTCCTTCAAACTTAATAGCTCCACCAAGTTCTGAAAATCAATCTCAGATTTGTAAAATTAAGAAAGACCAAGTGTTTGGCTGCTCTGTGGATGATGAAGCTGCTTTACCTCCATCTAAACGCATCCACCGTGCTTTAGAAGCTATGTCTGCCAATGCTGCTAAAGAAGGCCAAGCTTGCATGGAGACATCCTCTGTAATGACATCGAGTGGAAGATGCTGTATATCTACTATCAAGAGATGTGCTAGTATAACCATTAATAATCAAGGAGGTAATGATTTAGGACAACAAGTGTTTGATTCTTGTGGCATTGATTCTTCTCATGTTAGTGTGTGTAGTTTCTCAACTCGTTCAAATACAATTATTTCCATGGAGAATGAGTCATCTACAGAAGTGGATAAGCAGTTGGCCAAGTTCCAACAACACGAAACTGGGAAGGATGACATCCCAGGTGCTAGACAACAAGTTGCTGAAGATCTTAGTGATTCTGTTGTTTGTCATCCTGCCAAAATAGATTCACAAATTCAATCACATGAAAAAATTTCTCCTAATCTCGATTTGAAATATAGTCATGTTGGAAGCAATCAAGATTCACCAGGTCCATCTTTGTTACCAAATGGTGATGACAATGTCAGACCTGTGAACCATTCTGATGCATCTGATACATTGGAGCATGGTGGAATAAGTCTTGATCCTGTGGCAGGTTCCAGTGAAAGTGATAAATTGTTACCTCAAAATAGTATTAATGTGCCTCAGAATGTGGTGGTTGTTTGTGAGGATATGAAGCAAGCTGTTGGTGAAAGCAGCAAAATTAATAACATGCTTGAAGCTGTGAAAGAGGTAAAGTTTAAAGGTCTAGAGGAGGATATGCATTCTGTTTCAATATCAAATGATTATTCAGGTGAAAAGGGTAATTTAGGCATTCTGTCAAGCCCATCCTTGACTGACGGGAGGGTTTCCCTTCCTCTAGGTTCACCTCCAAATACAACTTCAGTTTGTAATATTTCCACGTCAGACAGTAGTAATATACTTCAAAATGGAAGTTGTAGCCCTGATGTACACCAGAAGAACACTTTATCTGGCCCTACTGGTGGATGGAAAGACGGGATTGTGGCAAATGAACAATCAAGATGTGTGGGGTCAACTGAAGCAGGAGATGCTGCTCTGTTGTACTTTGAAGCAATGCTTGGGACATTGAAAAGGACAAAGGAAAGTATTCGTCGAGCAACACGAATAGCTATTGACTGTGCAAAGTTTGGCATTGCAACTAAGGTGGTAGAAGTTCTTATCCACAATCTGGAAATTGAGTCAAGCCTGCATCGGAGGGTAGATCTGTTTTTTCTTGTTGACTCTATTGCTCAATGTTCTCGAGGGTTGAAAGGAGACATTGGTGGAGTATATCCATCTGCTATGAACGCAGTCCTGCCACGCCTACTGTCTGCTGCTGCTCCTCCTGGAAATGCTGCAAAAGAAAATCGTAGGCAATGTCTTAAGGTATTAAGGCTGTGGCTGGAGAGAAGAATTCTTCCTGAACGCGTTATTCGGCATCATATCCGGGAACTAGACTCATATAGCAGTTCAGCTTCTGCAGGTTTCTGCTCCCGACGTTCATTAAGAACTGAGAGGCCTTTTGATGACCCTGTTAGAGACATGGAGGGTATGCTTGTTGATGAATATGGAAGCAACTCAAGTTTTCAGCTACCTGGGTTTTGCATGCCTCGAATGCTTGAAGACGGAGGGAGTGATTCTGATGGAGGGGACTTTGAGGCTGTCACGCCTGAGCATGATTCTGAAACTTGTGAATTGCAAGAAACTGCTCATGCTATTGAGAAACACAGGCATGTGTTGGAAGATGTTGATGGTGAGCTTGAAATGGAAGATGTGGCTCCCTGTGTTGATGTTGAATTGAATTCGATTTGTAATGTTGACAGAGGAAATGCCACACAGTTTGAGAAGAATCTTCCTGTGTCCTTTGCTCCTCCTTTTCCACAGGATGTGCCACCAtcttccccacctccaccatcataccctccaccacctccacctcctcctcctcctcctcctcctcctcttcctctacctccACTACCCCCTACATCGCACCTTTTGTCAGCTACCCCTGATCAATATCATGTTGCAGTTGATTCAAAAGTTTTTGAAGATTCACCGACCGTGAAAGCCAATGTACACCATCCTATCGCTCAGCCCTTTGCTGTACCAAGAAATAGTCAGCCTATCAGTGATGCAGTGCAGTACCCAGTCCAGGAATGTAGAGACATGCCGATGCAGATGCCTGAGTCTACTAGCTCTTTCAACACTTTGCCTGCACAATCAACAGACAATATCAGGAACGCTGATGGTGTTACTATGCATAATAGAGGTTACTCTATACCACCACCTCTCCATGTGCCATCCGATCAGTTTTCTTTTGTTCATGGGGAACATCGTATGAGATCTCAAAGGGAGGTTCCCCCACCTCTGTATTCCAATGGGCACCACTTTGTGCCGAACATGATGAGAGAGTATGGTTTTGACAATCATGAGAGATTAAGACCACCTTCATATGATTACCAAGAGAGATGGAATATTCCTGCTTCTTATTCTGGTCCTCAGTATCATGATAGAGGTGTGACTGCTCCTTATGGTTGTCATCCAAGTGAATCAGCTAGATTACCAGGTCATGGATGGAGATGTCCTCCCCCGTCAATGGATTACGGGGACTCCATGCCTTTCAGACCACACTTTGAAGATGCAATTCCAGTAGCAAACCGAGGCCCAGGCTTTTGGCAGCCAAGGTGA 4089 0.4211 MPPSRRKGGKNPPAAVAAACRQFKLGDLVLAKVKGFPAWPAKVSEPQKWGFSADQKKVFVYFFGTQQIGFCNPADVEAFTEEKKQSFSKRQGKAGEFARAVKEIIEIYEKLKRGNTDADTSSGVEVASVDESNPPDPSANMGLKDQMDAPLTIDSQMTSSNCAVDRPELCAAEDDSAVALRDESYNIEASLEEPIDNGIVTSTVKSHFSITQGNNGGNSDGNIPADAIQNMSIRRSKRIRKSPDLLGCDDTDSPAFASNVSMGDNDSEIITINSDAVSLNEGCPIDSNLKLEQSEPIECPDGKDDLNKGLDLEIKAVINKKKRKLNRKKETNDAASQNASQGLQNMGGNSKERCPDPDGDEHLPLLKRARVRMGKSSAETEINSVVQVEVKNGKEDITDSPQQIITSSNCENGSLAEGGSSVLNEALVNVSPSNLIAPPSSENQSQICKIKKDQVFGCSVDDEAALPPSKRIHRALEAMSANAAKEGQACMETSSVMTSSGRCCISTIKRCASITINNQGGNDLGQQVFDSCGIDSSHVSVCSFSTRSNTIISMENESSTEVDKQLAKFQQHETGKDDIPGARQQVAEDLSDSVVCHPAKIDSQIQSHEKISPNLDLKYSHVGSNQDSPGPSLLPNGDDNVRPVNHSDASDTLEHGGISLDPVAGSSESDKLLPQNSINVPQNVVVVCEDMKQAVGESSKINNMLEAVKEVKFKGLEEDMHSVSISNDYSGEKGNLGILSSPSLTDGRVSLPLGSPPNTTSVCNISTSDSSNILQNGSCSPDVHQKNTLSGPTGGWKDGIVANEQSRCVGSTEAGDAALLYFEAMLGTLKRTKESIRRATRIAIDCAKFGIATKVVEVLIHNLEIESSLHRRVDLFFLVDSIAQCSRGLKGDIGGVYPSAMNAVLPRLLSAAAPPGNAAKENRRQCLKVLRLWLERRILPERVIRHHIRELDSYSSSASAGFCSRRSLRTERPFDDPVRDMEGMLVDEYGSNSSFQLPGFCMPRMLEDGGSDSDGGDFEAVTPEHDSETCELQETAHAIEKHRHVLEDVDGELEMEDVAPCVDVELNSICNVDRGNATQFEKNLPVSFAPPFPQDVPPSSPPPPSYPPPPPPPPPPPPPPLPLPPLPPTSHLLSATPDQYHVAVDSKVFEDSPTVKANVHHPIAQPFAVPRNSQPISDAVQYPVQECRDMPMQMPESTSSFNTLPAQSTDNIRNADGVTMHNRGYSIPPPLHVPSDQFSFVHGEHRMRSQREVPPPLYSNGHHFVPNMMREYGFDNHERLRPPSYDYQERWNIPASYSGPQYHDRGVTAPYGCHPSESARLPGHGWRCPPPSMDYGDSMPFRPHFEDAIPVANRGPGFWQPR 1362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02091 1362 MobiDBLite consensus disorder prediction 1090 1131 - -
Cca03g02091 1362 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1362 - -
Cca03g02091 1362 MobiDBLite consensus disorder prediction 618 675 - -
Cca03g02091 1362 MobiDBLite consensus disorder prediction 618 633 - -
Cca03g02091 1362 MobiDBLite consensus disorder prediction 115 141 - -
Cca03g02091 1362 MobiDBLite consensus disorder prediction 323 362 - -
Cca03g02091 1362 Coils Coil 318 338 - -
Cca03g02091 1362 MobiDBLite consensus disorder prediction 1085 1134 - -
Cca03g02091 1362 SMART PWWP_4 23 80 IPR000313 -
Cca03g02091 1362 ProSiteProfiles CID domain profile. 814 955 IPR006569 -
Cca03g02091 1362 Gene3D - 15 118 - -
Cca03g02091 1362 Pfam PWWP domain 26 108 IPR000313 -
Cca03g02091 1362 Pfam CID domain 822 944 IPR006569 -
Cca03g02091 1362 PANTHER PWWP DOMAIN PROTEIN 1 1362 - -
Cca03g02091 1362 SUPERFAMILY Tudor/PWWP/MBT 20 115 - -
Cca03g02091 1362 CDD HDGF_related 21 104 IPR035496 -
Cca03g02091 1362 ProSiteProfiles PWWP domain profile. 25 82 IPR000313 -
Cca03g02091 1362 MobiDBLite consensus disorder prediction 332 348 - -
Cca03g02091 1362 Gene3D - 820 959 IPR008942 -
Cca03g02091 1362 SMART 558neu5 821 952 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02091 Cca-Chr3 41176979 41190125 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02091 - - gmx:112997599 2060.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02091 03 41176979 41190125 Cca03g02091 03 41176979 41190125 ECH
Cca03g02091 03 41176979 41190125 Cca02g01156 02 28968807 28982538 PCT