Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02085 ATGGTGCAGAGTCTGTGTTTGATGGCTTCTCATGGTTACCCTCCTGGCCTTGTCTTACACCCCCAACTGGGCTTGGCCGGCACCAATATCAAGGGCTATAAAACATCCTTTCCTTCTACAGTAGCAAAATCAGAGCTGATCAGATATCAGTCTCCTTGTCTTAAGCCAGGACTGTGTGAGGATTTGAGGAAATCCGAAAATGAATCGGTTGATTATAATAATAAGTTTTTCAATGTTGACTTCTCAGTTCAAAGACCCATGCTTATGGATGACCAAGCAAAGTTCTCAAATGCAGTACTTTTTGGCTTTGGCATTGTTGAACAATGCACTAAGCGTGATAAAATTTTAAATCTCCTAATGTCCGAGACTGCTGAAGCAGGGATAGATGGAGCAAATTTATCCTTGTTATCGGATTTGATGAAATTGCAGTTGTCAGGCATTAATGAACCTCAGCAACCATTGTCATCTCTTATCTACCCAACTGGCAAATTCAACATCCAGAAGCCTTTGCTGCATTTTGTTCAAGATTCAGCCCTTTCTTCAAAGATCATGGTTCATCCAGATGGTCAAATCACATTTATGGGTACTGCAATTGAGTTGAAAGACCTTCTCTCTGTTGTTGCCGAGTCATATTTGTCAAAATGCTCACATAAGTTTGGAAAGCAATCTATGCTTGTTCCACACTTCAGTAGGGTGAATATCAATGAAGTAGAGATAAGCCATTCCTCCACACTGAAGATTCAATCTGCCTTAACTGCTCCTTTAAGGAGTCCTGAGAAAGTCAAAATCAAGCCATCACCAAGAAAGAACAAGAAAGCAGGCAGGGAGAGGAATCTCTACAAGAACTATTCACATGCTTGTGAGATCCTTCTGTCCCTGATGGTTGACAAGAAGCAACGTCGGAAAACGGTAATTCTCTCACTGAAGAAATCTGGCCCCGAGCTTCCTGAGCTCCTGACACAAGTTTCTGCTGGCATTGCTGGTACCGGCCTAGCGGTCCTGCTATCTGTAATCTGTAACCTAGCTTGTGGAAGGTCTACCATTTGTGCTTCTGCCTTTTTCAATACTGGGTTTGGATTTGGGATGGTTTGGCTTTCTGGGGCAGTACATAAGCTAAGGGCCACAATTGTCAGCTTGAGCAAGAATGCAGGAAAGTTGGCTTTGAAAGAAGAGGAAATGATGCAGAAGCTGGATAAGAGCATAAGAGATATTTACTATACTGCTGCAGCATTGTTAGCAGTAGTGGTGCTAAGGCTTGCTTGA 1263 0.4268 MVQSLCLMASHGYPPGLVLHPQLGLAGTNIKGYKTSFPSTVAKSELIRYQSPCLKPGLCEDLRKSENESVDYNNKFFNVDFSVQRPMLMDDQAKFSNAVLFGFGIVEQCTKRDKILNLLMSETAEAGIDGANLSLLSDLMKLQLSGINEPQQPLSSLIYPTGKFNIQKPLLHFVQDSALSSKIMVHPDGQITFMGTAIELKDLLSVVAESYLSKCSHKFGKQSMLVPHFSRVNINEVEISHSSTLKIQSALTAPLRSPEKVKIKPSPRKNKKAGRERNLYKNYSHACEILLSLMVDKKQRRKTVILSLKKSGPELPELLTQVSAGIAGTGLAVLLSVICNLACGRSTICASAFFNTGFGFGMVWLSGAVHKLRATIVSLSKNAGKLALKEEEMMQKLDKSIRDIYYTAAALLAVVVLRLA 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02085 420 PANTHER OS05G0143300 PROTEIN 2 420 - -
Cca03g02085 420 PANTHER PROTEIN, PUTATIVE-RELATED 2 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02085 Cca-Chr3 41111380 41116536 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02085 - - gmx:100777424 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02085 03 41111380 41116536 Cca03g02085 03 41111380 41116536 ECH
Cca03g02085 03 41111380 41116536 Cca02g01160 02 29062308 29067433 PCT